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List of results

• Just-in-time synthesis for motion planning with temporal logic  + (2013 International Conference on Robotics and Automation (ICRA))
• Patching task-level robot controllers based on a local μ-calculus formula  + (2013 International Conference on Robotics and Automation (ICRA))
• Collaborative System Identification via Parameter Consensus  + (2014 American Control Conference (ACC))
• Modeling the Effects of Compositional Context on Promoter Activity in an E. Coli Extract based Transcription-Translation System  + (2014 Conference on Decision and Control (CDC))
• Designing Robustness to Temperature in a Feedforward Loop Circuit  + (2014 Conference on Decision and Control (CDC))
• Model Predictive Control with Signal Temporal Logic Specifications  + (2014 Conference on Decision and Control (CDC))
• Privacy Preserving Average Consensus  + (2014 Conference on Decision and Control (CDC))
• Synthesizing Combination Therapies for Evolutionary Dynamics of Disease for Nonlinear Pharmacodynamics  + (2014 Conference on Decision and Control (CDC))
• A Compositional Approach to Stochastic Optimal Control with Co-safe Temporal Logic Specifications  + (2014 IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS))
• A stochastic framework for the design of transient and steady state behavior of biochemical reaction networks  + (2015 Conference on Decision and Control (CDC))
• A State-space Realization Approach to Set Identification of Biochemical Kinetic Parameters  + (2015 European Control Conference (ECC))
• Robust Model Predictive Control for Signal Temporal Logic Synthesis  + (2015 IFAC Conference on Analysis and Design of Hybrid Systems (ADHS))
• Reactive Synthesis from Signal Temporal Logic Specifications  + (2015 International Conference on Hybrid Systems: Computation and Control (HSCC))
• Linear System Identifiability from Distributional and Time Series Data  + (2016 American Control Conference (ACC))
• Symbolic construction of GR(1) contracts for systems with full information  + (2016 American Control Conference (ACC))
• Quantifying Resource Competition and its Effects in the TX-TL System  + (2016 Conference on Decision and Control (CDC))
• Model Predictive Control for an Uncertain Smart Thermal Grid  + (2016 European Control Conference (ECC))
• Control design for hybrid systems with TuLiP: The temporal logic planning toolbox  + (2016 IEEE Conference on Control Applications (CCA))
• Synthesis of Control Protocols for Switched Electrical Power Systems for Commercial Applications with Safety Specifications  + (2016 IEEE Symposium on Computational Intelligence in Control and Automation)
• Stochastic Gene Expression in Single Gene Oscillator Variants  + (2016 Synthetic Biology: Engineering, Evolution and Design (SEED) Conference)
• The role of single occupancy effects on integrase dynamics in a cell-free system  + (2016 Synthetic Biology: Engineering, Evolution and Design (SEED) Conference (17 May 2016))
• Decomposing GR(1) Games with Singleton Liveness Guarantees for Efficient Synthesis  + (2017 Conference on Decision and Control (CDC))
• Enhancing tolerance to unexpected jumps in GR(1) games  + (2017 Int'l Conference on Cyberphysical Systems (ICCPS))
• Learning-Based Abstractions for Nonlinear Constraint Solving  + (2017 International Joint Conference on Artificial Intelligence (IJCAI))
• Quantitative Modeling of Integrase Dynamics Using a Novel Python Toolbox for Parameter Inference in Synthetic Biology  + (2017 Synthetic Biology: Engineering, Evolution, and Design (SEED) Conference)
• A Bayesian approach to inferring chemical signal timing and amplitude in a temporal logic gate using the cell population distributional response  + (2017 Winter q-bio Conference)
• Single day construction of multi-gene circuits with 3G assembly  + (2018 Synthetic Biology: Engineering, Evolution and Design (SEED) Conference)
• Long-distance communication in synthetic bacterial consortia through active signal propagation  + (2018 Synthetic Biology: Engineering, Evolution and Design (SEED) Conference)
• Length and time scales of cell-cell signaling circuits in agar  + (2018 Winter q-bio)
• Control of bacterial population density with population feedback and molecular sequestration  + (2018 Winter q-bio)
• Modeling Dynamic Transcriptional Circuits with CRISPRi  + (2018 Winter q-bio)
• Counter-example Guided Learning of Bounds on Environment Behavior  + (2019 Conference on Robot Learning (CoRL))
• Parallelizing Synthesis from Temporal Logic Specifications by Identifying Equicontrollable States  + (2019 International Symposium on Robotics Research (ISRR))
• An automated model reduction tool to guide the design and analysis of synthetic biological circuits  + (2019 International Workshop on Biodesign Automation (IWBDA))
• Proof of concept continuous event logging in living cells  + (2019 Synthetic Biology: Engineering, Evolution and Design (SEED) Conference)
• Design of a genetic layered feedback controller in synthetic biological circuitry  + (2019 Synthetic Biology: Engineerinng, Evolution and Design (SEED) Conference)
• Invariant Sets for Integrators and Quadrotor Obstacle Avoidance  + (2020 American Control Conference (ACC))
• Risk-Averse Planning Under Uncertainty  + (2020 American Control Conference (ACC))
• Learning pose estimation for UAV autonomous navigation and landing using visual-inertial sensor data  + (2020 American Control Conference (ACC))
• Intermittent Connectivity for Exploration in Communication-Constrained Multi-Agent Systems  + (2020 International Conference on Cyberphysical Systems (ICCPS))
• Model Reduction Tools For Phenomenological Modeling of Input-Controlled Biological Circuits  + (2020 Winter q-bio)
• Theoretical Design of Paradoxical Signaling-Based Synthetic Population Control Circuit in E. coli  + (2020 Winter q-bio)
• A geometric and structural approach to the analysis and design of biological circuit dynamics: a theory tailored for synthetic biology  + (2020 Winter q-bio)
• Layered Feedback Control Improves Robust Functionality across Heterogeneous Cell Populations  + (2020 Winter q-bio)
• A two-state ribosome and protein model can robustly capture the chemical reaction dynamics of gene expression  + (2020 Winter q-bio)
• Risk-Averse Decision Making Under Uncertainty  + (2021 AAAI Conference on Artificial Intelligence (AAAI-21))
• Bistable State Switch Enables Ultrasensitive Feedback Control in Heterogeneous Microbial Populations  + (2021 American Control Conference (ACC))
• Systems Level Model of Dietary Effects on Cognition via the Microbiome-Gut-Brain Axis  + (2021 European Control Conference (ECC))
• From Specification to Implementation: Assume-Guarantee Contracts for Synthetic Biology  + (2022 International Workshop on Biodesign Automation (IWBDA))
• Towards Better Test Coverage: Merging Unit Tests for Autonomous Systems  + (2022 NASA Formal Methods Symposium (NFM))
• A 65nm CMOS Living-Cell Dynamic Fluorescence Sensor with 1.05fA Sensitivity at 600/700nm Wavelengths  + (2023 IEEE International Solid-State Circuits Conference (ISSCC))
• Controller Synthesis for Constrained Flight Systems via Receding Horizon Optimization  + (2nd AIAA "Unmanned Unlimited" Systems, Technologies, and Operations: Aerospace, Land, and Sea Conference and Workshop & Exhibit)
• Constrained risk-averse Markov decision processes  + (35th AAAI Conference on Artificial Intelligence (AAAI-21))
• Engineering Logical Inflammation Sensing Circuit for Modulating Gut Conditions  + (3rd International Microbiome Engineering Conference)
• POD Based Models of Self-Sustained Oscillations in the Flow Past an Open Cavity  + (6th AIAA/CEAS Aeroacoustics Conference)
• Dynamical Models for Control of Cavity Oscillations  + (7th AIAA/CEAS Aeroacoustics Conference)
• Planning and Optimization for Multi-Robot Planetary Cave Exploration under Intermittent Connectivity Constraints  + (8th ICAPS Workshop on Planning and Robotics)
• Nonholonomic Motion Planning: Steering Using Sinusoids  + (<em>IEEE T. Automatic Control</em>, 38(5):700-716)
• Control Primitives for Robot Systems  + (<em>IEEE T. Systems, Man, and Cybernetics</em>)
• Configuration Flatness of Lagrangian Systems Underactuated by One Control  + (<em>SIAM J. Control and Optimization</em>, 36(1):164-179)
• Nonlinear Control of Mechanical Systems: A Lagrangian Perspective  + (<i>Annual Reviews in Control</i>, v21, pp 31-45)
• Nonholonomic Mechanical Systems with Symmetry  + (<i>Archive for Rational Mechanics and Analysis</i>, 136(1):21-99)
• Tracking for Fully Actuated Mechanical Systems: A Geometric Framework  + (<i>Automatica</i> 35: (1) 17-34)
• Bifurcation Control of Rotating Stall with Actuator Magnitude and Rate Limits  + (<i>Automatica</i> 38(4):597-610 and 611-625)
• Decomposition of Human Motion into Dynamics Based Primitives with Application to Drawing Tasks  + (<i>Automatica</i>, 39(12):2085-2098)
• Future Directions in Control, Dynamics, and Systems: Overview, Grand Challenges, and New Courses  + (<i>European Journal of Control</i>, 9(2):144-158)
• Receding Horizon Control of a Vectored Thrust Flight Experiment  + (<i>IEE Proceedings on Control Theory and Applications</i>, 152(3):340-348)
• Appealing to a Non-traditional Audience: A New Approach to Teaching Feedback  + (<i>IEEE Control Systems Magazine</i>, October 2004)
• Distributed Computation for Cooperative Control  + (<i>IEEE Pervasive Computing</i>, 3(1):56-65)
• Stabilization of Trajectories for Systems with Nonholonomic Constraints  + (<i>IEEE T. Automatic Control</i>, 39: (1) 216-222)
• Trajectory generation for the N-trailer problem using Goursat normal form  + (<i>IEEE T. Automatic Control</i>, 40: (5) 802-819)
• A Motion Planner for Nonholonomic Robots  + (<i>IEEE T. Robotics and Automation</i>, 10: (5) 577-593)
• Real Time Trajectory Generation for Differentially Flat Systems  + (<i>Int'l. J. Robust & Nonlinear Control</i> 8:(11) 995-1020)
• Nonholonomic control systems: from steering to stabilization with sinuoids  + (<i>International Journal of Control</i> 62(4):849-870)
• A Sub-optimal Algorithm to Synthesize Control Laws for a Network of Dynamic Agents  + (<i>International Journal of Control</i>, 78(16):1302-1313)
• Variational Principles in Constrained Systems: Theory and Experiments  + (<i>International Journal of Nonlinear Mechanics</i>, 30(6): 793-815, 1995<br> CDS Technical Report 94-016)
• Modelling Efficient Pisciform Swimming for Control  + (<i>International Journal of Robust and Nonlinear Control</i>, 10(4):217-241)
• Rapid Hover to Forward Flight Transitions for a Thrust Vectored Aircraft  + (<i>J. Guidance, Control, and Dynamics</i>, 21(1):93-100, Jan-Feb 1998)
• Differentially Flat Systems with Inequality Constraints: An Approach to Real-Time Feasible Trajectory Generation  + (<i>J. Guidance, Control, and Dynamics</i>, Vol. 24, No. 2, pp. 219-227, 2001.)
• Evaluation of Bleed Valve Rate Requirements in Nonlinear Control of Rotating Stall  + (<i>J. Propulsion and Power</i>, 16(5):781-791, 2000<br> CDS Technical Report 98-001)
• Geometric Phases and Robotic Locomotion  + (<i>J. Robotic Systems</i>, 12(6):417-431)
• Active Control of an Axial Flow Compressor via Pulsed Air Injection  + (<i>J. Turbomachinery</i>, 119(4):742-752)
• Existence of Cascade Discrete-Continuous State Estimators for Systems on a Partial Order  + (<i>Lecture Notes in Computer Science</i> 3414:226--241)
• Observers for a Class of Hybrid Systems on a Lattice  + (<i>Lecture Notes in Computer Science</i>, 2993:311-325)
• Characterizing and Prototyping Genetic Networks with Cell-Free Transcription-Translation Reactions  + (<i>Methods</i>, 15(85):60-72, 2015)
• Stabilization of a Pitch Axis Flight Control Experiment with Input Rate Saturation  + (<i>Modeling, Identification and Control</i>, 20(4):225-240)
• Addressable and adaptable intercellular communication via DNA messaging  + (<i>Nature Communications</i>, 14:2358, 2023)
• Integrase-mediated differentiation circuits improve evolutionary stability of burdensome and toxic functions in E. coli  + (<i>Nature Communications<i>, 13:6822, 2022)
• Synthetic circuit for exact adaptation and fold-change detection  + (<i>Nucleic Acids Research</i>, 42(9):6078-6089, 2014)
• Model Reduction for Compressible Flows using POD and Galerkin Projection  + (<i>Physica D</i>, 189(1�2):115�129)
• Effective Transition Rates for Epitaxial Growth Using Fast Modulation  + (<i>Physical Review B</i>, 70(4), Art No. 045409)
• Layering assume-guarantee contracts for hierarchical system design  + (<i>Proceedings of the IEEE</i>, 2018)
• Configuration Controllability of Simple Mechanical Control Systems  + (<i>SIAM J. Control and Optimization</i>, 35(3):766-790)
• Differential Flatness and Absolute Equivalence of Nonlinear Control Systems  + (<i>SIAM J. Control and Optimization</i>, 36(4):1225-1239)
• A Homotopy Algorithm for Approximating Geometric Distributions by Integrable Systems  + (<i>System and Control Letters</i>, 27: (5) 285-291)
• Decompositions for Control Systems on Manifolds with an Affine Connection  + (<i>Systems & Control Letters</i> 31:199-205, 1997)
• Differential Flatness of Two One-Forms in Arbitrary Number of Variables  + (<i>Systems and Control Letters</i>, 36:317-326, 1999.)
• Synthesis of Control Protocols for Autonomous Systems  + (<i>Unmanned Systems</i>, 1(1):21-39 (2013))
• Automatic Synthesis of Robust Embedded Control Software  + (AAAI Spring Symposium on Embedded Reasoning: Intelligence in Embedded Systems, 2010 (To appear))
• Distributed Synthesis of Control Protocols for Smart Camera Networks  + (ACM/IEEE Second International Conference on Cyber-Physical Systems, 2011 (Submitted))
• Characterization of Integrase and Excisionase Activity in Cell-free Protein Expression System Using a Modeling and Analysis Pipeline  + (ACS Synthetic Biology, 12(2):511–523, 2023)
• Engineering the soil bacterium Pseudomonas synxantha 2-79 into a ratiometric bioreporter for phosphorus limitation  + (ACS Synthetic Biology, 2024)
• Assessment of Robustness to Temperature in a Negative Feedback Loop and a Feedforward Loop  + (ACS Synthetic Biology, 9(7):1581-1590, 2020)
• Robust Model Predictive Control with a Safety Mode: Applied to Small-Body Proximity Operations  + (AIAA Guidance, Navigation and Control Conference and Exhibit, Guidance, Navigation, and Control and Co-located Conferences, 2008)
• Control Program Verification for a Sample Titan Aerobot Mission  + (AIAA Infotech@Aerospace Conference and Exhibit, 2009 (submitted))
• A Framework for Low--Observable Tra jectory Generation in the Presence of Multiple Radars  + (AIAA Journal of Guidance, Control and Dynamics, 2008 (submitted))
• Model-Based Control of Cavity Oscillations, Part I: Experiments  + (AIAA Paper 2002-0971, 40th AIAA Aerospace Sciences Meeting , January 2002)
• Application of Correct-by-Construction Principles for a Resilient Risk-Aware Architecture  + (AIAA Space 2015 Conference and Exposition)
• Experimental Evaluation of Air Injection for Actuation of Rotating Stall in a Low Speed, Axial Fan  + (ASME Turbo Expo '95)
• Safety Verification of Fault Tolerant Goal-based Control Programs with Estimation Uncertainty  + (American Control Conference)
• Convergence Properties of Dynamic Agents Consensus Networks with Broken Links  + (American Control Conference)
• Nonlinear Lateral Control Strategy for Nonholonomic Vehicles  + (American Control Conference)
• Limits on the network sensitivity function for multi-agent systems on a graph  + (American Control Conference (ACC))
• Simple Delay-Based Implementation of Continuous-Time Controllers  + (American Control Conference (ACC))
• On Quantized Consensus by Means of Gossip Algorithm -- Part II: Convergence Time  + (American Control Conference (ACC))
• On Quantized Consensus by Means of Gossip Algorithm -- Part I: Convergence Proof  + (American Control Conference (ACC))
• Real-valued average consensus over noisy quantized channels  + (American Control Conference (ACC))
• A Multi-Model Approach to Identification of Biosynthetic Pathways  + (American Control Conference (ACC))
• Experimental Demonstration of the Dynamics and Stability of a Low Reynolds Number Swimmer Near a Plane Wall  + (American Control Conference (ACC), 2010 (Submitted))

• Optimal nonlinear guidance with inner-loop feedback for hypersonic re-entry  + (American Control Conference, 2006)

• Analysis of a Digital Clock for Molecular Computing  + (American Control Conference, 2007 (submitted))
• On-chip membrane protein cell-free expression enables development of a direct binding assay: A curious case of potassium channel KcsA-Kv1.3  + (Analytical Biochemistry, 556:70-77, 2018)
• Control education for societal-scale challenges: A community roadmap  + (Annual Reviews in Control, 55:1-17, 2023)
• A Method for Cost-Effective and Rapid Characterization of Engineered T7-based Transcription Factors by Cell-Free Protein Synthesis Reveals Insights into the Regulation of T7 RNA Polymerase-Driven Expression  + (Archives of Biochemistry and Biophysics, Volume 674, 15 October 2019, 108045)
• Communication and sensing trade-offs in cooperative mobile networks  + (Asian Journal of Control, 10(2):156-170)
• Control Over a Packet Dropping Network with Norm Bounded Uncertainties  + (Asian Journal of Control, 2008 (in press))
• Probabilistic Performance of State Estimation Across a Lossy Network  + (Automatica, 44(12):3046-3053, 2008 (to appear))
• Kalman Filtering Over A Packet-delaying Network: A Probabilistic Approach  + (Automatica, 45(9):2134-2140)
• A robust model predictive control algorithm augmented with a reactive safety mode  + (Automatica, 49(5):1251-1260)
• A chemical reaction network model of PURE  + (BioRxiv preprint, 2023)
• Population diversification in a yeast metabolic program promotes anticipation of environmental shifts  + (BioRxiv, 21 Feb 2014)
• Flat systems, equivalence and trajectory generation  + (CDS Technical Report)
• Limits on the Network Sensitivity Function for Multi-Agent Systems on a Graph  + (CDS Technical Report 2009.001)
• Nonholonomic Mechanical Systems and Symmetry  + (CDS Technical Report 94-013<br>To appear <i>Archive for Rational Mechanics and Analysis</i>)
• Conversion and Verification Procedure for Goal-Based Control Programs  + (CDS Technical Report, California Institute of Technology)
• Modeling and Control of Epitaxial Thin Film Growth  + (Caltech Mechanical Engineering)
• Quantized Consensus via Adaptive Stochastic Gossip Algorithm  + (Conference on Decision and Control (CDC))
• A bio-plausible design for visual attitude stabilization  + (Conference on Decision and Control (CDC))
• Receding Horizon Temporal Logic Planning for Dynamical Systems  + (Conference on Decision and Control (CDC))
• Geometric Control of Particle Manipulation in a Two-Dimensional Fluid  + (Conference on Decision and Control (CDC))
• Optimal Sensor Hop Selection: Sensor Energy Minimization and Network Lifetime Maximization with Guaranteed System Performance  + (Conference on Decision and Control (CDC))
• Design and performance of in vitro transcription rate regulatory circuit  + (Conference on Decision and Control (CDC))
• Design of insulating devices for in vitro synthetic circuits  + (Conference on Decision and Control (CDC), 2009 (Submitted))
• Compositional stability analysis based on dual decomposition  + (Conference on Decision and Control (CDC), 2009 (Submitted))
• Tuning a synthetic in vitro oscillator using control-theoretic tools  + (Conference on Decision and Control (CDC), 2010 (Submitted))
• Synthesis of Embedded Control Systems with High Sampling Frequencies  + (Conference on Decision and Control (CDC), 2010 (Submitted))
• Estimation schemes for networked control systems using UDP-like communication  + (Conference on Decision and Control (CDC), 3945 - 3951)
• Formal Verification of an Autonomous Vehicle System  + (Conference on Decision and Control, 2008 (submitted))
• Failure Probability of Verifiable Goal-based Control Programs due to State Estimation Uncertainty  + (Conference on Decision and Control, 2008 (submitted))
• Sensing, Navigation and Reasoning Technologies for the DARPA Urban Challenge  + (DARPA Urban Challenge Final Report)
• A Case Study in Approximate Linearization: The Acrobot Example  + (ERL Technical Memo, May 1991)
• The Dynamics of Thin Film Growth: A Modeling Study  + (Electrochemical Society, May 2000)
• Reduction Strategies for Kinetic Monte Carlo Models of Thin Film Growth  + (Electrochemical Society, May 2001)
• Autonomous Reorientation of a Manuever-Limited Spacecraft Under Simple Pointing Constraints  + (Engineer's Thesis, Caltech, May 1997)
• Control Over a Network: Using Actuation Buffers to Reduce Transmission Frequency  + (European Control Conference, 2007 (Submitted))
• Probabilistic Safety Analysis of Sensor-Driven Hybrid Automata  + (Hybrid Systems: Computation and Control, 2008 (submitted))
• A Contract-Based Methodology for Aircraft Electric Power System Design  + (IEEE Access, 2014. DOI 10.1109/ACCESS.2013.2295764)
• Interfacing TuLiP with the JPL Statechart Autocoder: Initial progress toward synthesis of flight software from formal specifications  + (IEEE Aerospace Conference, 2016)
• Robustness Guarantees for Structured Model Reduction of Dynamical Systems  + (IEEE Conference on Decision and Control (CDC), 2021)
• The Python Control Systems Library (python-control)  + (IEEE Conference on Decision and Control (CDC), 2021)
• Future Directions in Control in an Information-Rich World  + (IEEE Control Systems Magazine)
• Uncertain semantics, representation nuisances, and necessary invariance properties of bootstrapping agents  + (IEEE International Conference on Development and Learning and Epigenetic Robotics (ICDL/EpiRob))
• Effective Sensor Scheduling Schemes in a Sensor Network by Employing Feedback in the Communication Loop  + (IEEE International Conference onControl Applications (CCA), 1006 - 1011)
• Data Transmission over Networks for Estimation and Control  + (IEEE Transactions on Automatic Control, 2007 (submitted))
• Consensus Seeking Using Multi-Hop Relay Protocol  + (IEEE Transactions on Automatic Control, 2007 (submitted))
• Delay-Based Controller Design for Continuous-Time and Hybrid Applications  + (IEEE Transactions on Automatic Control, 2010 (Submitted))
• Receding Horizon Temporal Logic Planning  + (IEEE Transactions on Automatic Control, 2010 (Submitted))
• Consensus problems in networks of agents with switching topology and time-delays  + (IEEE Transactions on Automatic Control, 49(9):1520--1533)
• To Drop or Not to Drop: Design Principles for Kalman Filtering Over Wireless Fading Channels  + (IEEE Transactions on Automatic Control, 54(2):376-381)
• Kalman Filtering Over A Packet Dropping Network: A Probabilistic Perspective  + (IEEE Transactions on Automatic Control, 55(9):594-604)
• Flight dynamics and control of evasive maneuvers: the fruit fly's takeoff  + (IEEE Transactions on Biomedical Engineering, 56(9), 2009 (To appear))
• Rules of the Road: Safety and Liveness Guarantees for Autonomous Vehicles  + (IEEE Transactions on Robotics, 39(3))
• Asynchronous Distributed Averaging on Communication Networks  + (IEEE/ACM Transactions on Networking, 15(3):512 - 520)
• A bio-plausible design for visual pose stabilization  + (IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS), 2010 (To appear))
• Resource optimisation in a wireless sensor network with guaranteed estimator performance  + (IET Control Theory and Applications, 4(5):710-723)
• Stability and Performance of Non-Homogeneous Multi-Agent Systems on a Graph  + (IFAC World Congress, 2010 (Submitted))
• Decentralized Multi-Agent Optimization via Dual Decomposition  + (IFAC World Congress, 2011 (Submitted))
• On Measures of Non-Integrability of Pfaffian Systems  + (IFAC World Congress, July 1996)
• Online Control Customization via Optimization-Based Control  + (In <i>Software-Enabled Control: Information Technology for Dynamical Systems</i>, T. Samad and G. Balas (eds.), IEEE Press, 2001 (submitted))
• Geometric Approaches to Control in the Presence of Magnitude and Rate Saturations  + (In <i>The Astrom Symposium on Control</i>, pp. 43-72)
• Pre-orders for Reasoning about Stability Properties with respect to Input of Hybrid Systems  + (International Conference on Embedded Software (EMSOFT))
• TuLiP: A Software Toolbox for Receding Horizon Temporal Logic Planning  + (International Conference on Hybrid Systems: Computation and Control (HSCC))
• Receding Horizon Control for Temporal Logic Specifications  + (International Conference on Hybrid Systems: Computation and Control (HSCC))
• A bootstrappable bio-plausible design for visual pose stabilization  + (International Conference on Robotics and Automation (ICRA), 2010 (Submitted))
• Automatic Conversion Software for the Safety Verification of Goal-Based Control Programs  + (International Conference on Software Engineering, 2009 (submitted))
• Using Hierarchical Decomposition to Speed Up Average Consensus  + (International Federation of Automatic Control (IFAC) World Congress, 2008 (to appear))
• Estimation Over Wireless Sensor Networks: Tradeoff between Communication, Computation and Estimation Qualities  + (International Federation of Automatic Control (IFAC) World Congress, 2008 (to appear))
• A Robust Nonlinear Model Predictive Control Algorithm with a Safety Mode  + (International Federation of Automatic Control (IFAC) World Congress, 2008)
• Robustness guarantees for structured model reduction of dynamical systems with applications to biomolecular models  + (International Journal on Robust and Nonlinear Control (IJRNC), 1-29, 2022)
• Situational Reasoning for Road Driving in an Urban Environment  + (International Workshop on Intelligent Vehicle Control Systems (IVCS), 2008 (submitted))
• Distributed Mission and Contingency Management for the DARPA Urban Challenge  + (International Workshop on Intelligent Vehicle Control Systems (IVCS), 2008)
• An analytical approach to bistable biological circuit discrimination using real algebraic geometry  + (J. R. Soc. Interface 2015 12 20150288; DOI: 10.1098/rsif.2015.0288.)
• Recent research in cooperative control of multivehicle systems  + (Journal Of Dynamic Systems Measurement And Control-Transactions Of The Asme, 129:571-583)
• Alice: An information-rich autonomous vehicle for high-speed desert navigation  + (Journal of Field Robotics, 23(9):777-810)
• Linear models for control of cavity flow oscillations  + (Journal of Fluid Mechanics, 547:317-330)
• Fast and flexible simulation and parameter estimation for synthetic biology using bioscrape  + (Journal of Open Source Software (JOSS), 2023)
• Protocols for Implementing an Escherichia coli Based TX-TL Cell-Free Expression System for Synthetic Biology  + (Journal of Visualized Experiments (79), e50762, doi:10.3791/50762)
• Data-driven network models for genetic circuits from time-series data with incomplete measurements  + (Journal of the Royal Society Interface 18 (182), 20210413)
• Experiments in Planar Manipulation and Grasping  + (MS Project Report, UC Berkeley, Dec 1988)
• Rapid prototyping of biomolecular circuits through module characterization in cell-free expression systems  + (Masters Thesis, Lund University)
• Delay-dependent Stability of Genetic Regulatory Networks  + (Masters Thesis, Lund University)
• Metabolic engineering of Pseudomonas putida for production of vanillylamine from lignin-derived substrates  + (Microbial Biotechnology, 14( 6), 2448– 2462, 2021)
• Layered Feedback Control Overcomes Performance Trade-Off in Synthetic Biomolecular Networks  + (Nature Communications 13(1):1-13, 2022)
• Regulatory activity revealed by dynamic correlations in gene expression noise  + (Nature Genetics, 40:1493-1498)
• Model reduction of interconnected linear systems  + (Optimal Control Applications and Methods, 2008 (to appear))
• BioCRNpyler: Compiling chemical reaction networks from biomolecular parts in diverse contexts  + (PLoS Computational Biology, 18(4), e1009987, 2022)
• Optimal and Cooperative Control of Vehicle Formations  + (PhD Dissertation)
• Passive Control of Flutter and Forced Response in Bladed Disks via Mistuning  + (PhD Dissertation)
• Effects of Actuator Limits in Bifurcation Control with Applications to Active Control of Fluid Instabilities in Turbomachinery  + (PhD Dissertation, California Institute of Technology, June 2000)
• Coarse analysis of multiscale systems: diffuser flows, charged particle motion, and connections to averaging theory  + (PhD Dissertation, Caltech Aeronautics, May 2005)
• Nonlinear Control of Mechanical Systems: A Reimannian Geometry Approach  + (PhD Dissertation, Caltech, August 1998)
• Nonlinear Control of Rotating Stall and Surge with Axisymmetric Bleed and Air Injection on Axial Flow Compressors  + (PhD Dissertation, Caltech, August 1998)
• Exponential Stabilization of Driftless Nonlinear Control Systems  + (PhD Dissertation, Caltech, Dec 1994)
• Robotic Manipulation with Flexible Link Fingers  + (PhD Dissertation, Caltech, January 1997)
• Trajectory Generation for Nonlinear Control Systems  + (PhD Dissertation, Caltech, Jul 1996)
• Aspects of Geometric Mechanics and Control of Mechanical Systems  + (PhD Dissertation, Caltech, Jun 1995)
• The Mechanics and Control of Robotic Locomotion with Applications to Aquatic Vehicles  + (PhD Dissertation, Caltech, June 1998)
• Differentially Flat Nonlinear Control Systems  + (PhD Dissertation, Caltech, May 1997)
• Nonlinear Control and Modeling of Rotating Stall in an Axial Flow Compressor  + (PhD Dissertation, Caltech, Sep 1996)
• Distributed Gradient Systems and Dynamic Coordination  + (PhD Dissertation, Control and Dynamical Systems)
• Bio-Inspired Visuomotor Convergence in Navigation and Flight Control Systems  + (PhD Dissertation, Control and Dynamical Systems)
• State Estimation in Multi-Agent Decision and Control Systems  + (PhD Dissertation, Control and Dynamical Systems)
• Real-Time Optimal Trajectory Generation for Constrained Dynamical Systems  + (PhD Dissertation, Control and Dynamical Systems)
• Managing information in networked and multi-agent control systems  + (PhD Dissertation, Mechanical Engineering)
• System architectures and environment modeling for high-speed autonomous navigation  + (PhD Dissertation, Mechanical Engineering)
• Robotic Control and Nonholonomic Motion Planning  + (PhD Dissertation, UC Berkeley, Dec 1990)
• Real-time trajectory generation for constrained nonlinear dynamical systems using non-uniform rational B-spline basis functions  + (PhD dissertation, Control and Dynamical Systems, Nov 2007)
• Autonomous Driving in Urban Environments: Approaches, Lessons and Challenges  + (Philosophical Transactions of the Royal Society - A, 2009 (Submitted))
• Controlling biological networks by time-delayed signals  + (Philosophical Transactions of the Royal Society - A, 2009 (Submitted))
• Guidelines for Designing the Antithetic Feedback Motif  + (Physical Biology, 17(5):055002, 2020)
• Dynamics and stability of a class of low Reynolds number swimmers near a wall  + (Physical Review E, 19(4))
• Engineering Transcriptional Regulator Effector Specificity Through Rational Design and Rapid Prototyping  + (Presented at Synthetic Biology: Engineering, Evolution and Design (SEED), 14-18 July 2014)
• Prototyping 1,4-butanediol (BDO) biosynthesis pathway in a cell-free transcription-translation (TX-TL) system  + (Presented at Synthetic Biology: Engineering, Evolution and Design (SEED), 10-13 June 2015)
• Design of a Toolbox of RNA Thermometers  + (Presented at Synthetic Biology: Engineering, Evolution and Design (SEED), 10-13 June 2015)
• Design and Implementation of a Biomolecular Circuit for Tracking Protein Concentration  + (Presented, 2013 American Control Conference (ACC))
• Characterization of minimum inducer separation time for a two-input integrase-based event detector  + (Presented, 2015 Winter q-bio Conference (5 Nov 2014))
• Rapid in vitro engineering of 16 two-input logic gates  + (Presented, 2016 Winter q-Bio)
• Use of population-level cell-state switching for recording transient inducer pulses  + (Presented, 2016 Winter q-Bio (5 Nov 2015))
• Finding stationary solutions to the chemical master equation by gluing state spaces at one or two states recursively  + (Presented, 2016 Winter q-Bio Conference)
• Applications and Extensions of Goursat Normal Form to Control of Nonlinear Systems  + (Proceedings of the 32nd Conference on Decision and Control<br>December 1993)
• Exponential Stabilization of Driftless Nonlinear Control Systems via Time-varying, Homogeneous Feedback  + (Proceedings of the 32nd Conference on Decision and Control<br>December 1994)
• Geometric Phases, Control Theory, and Robotics  + (Proceedings of the Board on Mathematical Sciences, Science and Technology Symposium, Washington DC, 12 April 1994)
• Consensus and Cooperation in Networked Multi-Agent Systems  + (Proceedings of the IEEE, 95(1):215 - 233, 2007)
• Cone invariance and rendezvous of multiple agents  + (Proceedings of the Institution of Mechanical Engineers, Part G: Journal of Aerospace Engineering, 223(6):779-789)
• Trajectory Generation for Mechanical Systems with Application to Robotic Locomotion  + (Proceedings, 1998 Workshop on Algorithmic Foundations of Robotics)