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List of results

• SURF 2013: Robot Motion Planning with Complex Tasks  + (17:10:41, 3 January 2013)
• SURF 2013: Synthetic logic circuits using RNA aptamers  + (17:11:23, 3 January 2013)
• SURF 2013: Role of Delays in Biological Processes  + (17:20:14, 3 January 2013)
• Understanding the Effect of Compositional Context on Biocircuit Performance  + (02:15:16, 4 January 2013)
• SURF 2013: Understanding the Effect of Compositional Context on Biocircuit Performance  + (02:18:59, 4 January 2013)
• SURF 2013: Investigating physical methods of protecting linear DNA fragments in cell-free expression systems  + (19:33:04, 4 January 2013)
• SURF 2013: Synthetic biological circuit design implementing protein degradation in-vitro  + (22:22:31, 4 January 2013)
• SURF 2013: Designing phosphorylation sensitive protein domains for use in synthetic circuits  + (22:33:07, 6 January 2013)
• ME/CS 132a, Winter 2012  + (09:08:49, 8 January 2013)
• File:SimBiologyTutorial.pdf  + (17:57:38, 11 January 2013)
• File:SimbiologyTutorial.pdf  + (18:00:40, 11 January 2013)
• Chris Warner, 15 Jan 2013  + (16:56:15, 13 January 2013)
• CDS 140a Winter 2013 Homework 2  + (18:47:22, 15 January 2013)
• CDS 140a Winter 2013 Homework 1  + (18:49:18, 15 January 2013)
• SURF 2013: The connection between biological structure and function in dynamic environments  + (21:59:49, 16 January 2013)
• Toxin-antitoxin system analysis  + (02:56:26, 22 January 2013)
• File:VarExample 2012.pdf  + (06:03:43, 22 January 2013)
• Yushan Chen, 23 January 2013  + (04:50:54, 23 January 2013)
• CDS 140a Winter 2013 Homework 3  + (21:05:37, 25 January 2013)
• SURF discussions, Jan 2013  + (08:44:05, 27 January 2013)
• BE 150/Bi 250b Winter 2012  + (06:17:44, 31 January 2013)
• CDS 140a Winter 2013 Homework 4  + (03:09:43, 4 February 2013)
• ME/CS 132a, Winter 2013, Lab 1  + (00:07:43, 5 February 2013)
• File:MXu ControlSynthesis WebEx 4Feb13 iCyPhy.pdf  + (05:57:42, 5 February 2013)
• File:NOzay-3Feb13-ICyPhy.pdf  + (05:59:41, 5 February 2013)
• ICyPhy Webex Feb 4 2012  + (21:40:50, 5 February 2013)
• Vasumathi Raman, 11 February 2013  + (17:23:25, 11 February 2013)
• ME/CS 132a, Winter 2013, Lab 1 Sign-Up  + (22:09:29, 12 February 2013)
• CDS 140a Winter 2013 Homework 6  + (22:53:54, 12 February 2013)
• CDS 140a Winter 2013 Homework 5  + (18:39:55, 19 February 2013)
• Yilin Mo, 25 February 2013  + (18:26:30, 24 February 2013)
• Group Schedule, Winter 2013  + (05:15:43, 1 March 2013)
• CDS 140a Winter 2013 Homework 7  + (16:33:00, 3 March 2013)
• BE 150/Bi 250b Winter 2013  + (18:49:53, 6 March 2013)
• March 2013 meeting schedule  + (21:59:28, 6 March 2013)
• BE 150/Bi 250b project ideas, Winter 2013  + (17:53:30, 8 March 2013)
• CDS 110b, Winter 2013 - Course Schedule  + (22:03:18, 8 March 2013)
• EECI 2013: Temporal Logic  + (04:13:55, 11 March 2013)
• EECI 2013: Computer Session: Spin  + (04:15:07, 11 March 2013)
• CDS 140a Winter 2013 Homework 8  + (00:03:18, 12 March 2013)
• File:MG3-bifdiag.png  + (00:03:53, 12 March 2013)
• ME/CS 132a, Winter 2013, Lab 2 Sign-Up  + (00:19:37, 12 March 2013)
• File:Murray-mar13.jpg  + (05:41:53, 13 March 2013)
• EECI 2013: Receding Horizon Temporal Logic Planning  + (09:24:16, 16 March 2013)
• EECI 2013: Introduction: Protocol-Based Control Systems  + (10:04:38, 18 March 2013)
• EECI 2013: Deductive Verification of Hybrid Systems  + (08:05:54, 21 March 2013)
• EECI 2013: Synthesis of Reactive Control Protocols  + (08:10:23, 21 March 2013)
• EECI 2013: Summary and Open Questions  + (09:01:19, 22 March 2013)
• EECI 2013: Advanced Topics  + (09:02:22, 22 March 2013)
• Aircraft models  + (21:43:06, 2 April 2013)
• File:ME132Overview.pdf  + (23:19:01, 15 April 2013)
• File:ME132Homework1.pdf  + (23:20:00, 15 April 2013)
• File:Cobstacle.pdf  + (23:27:09, 15 April 2013)
• File:StarAlgorithm.pdf  + (23:45:20, 15 April 2013)
• File:Cobstacle param.pdf  + (23:51:37, 15 April 2013)
• File:ME132Homework2.pdf  + (17:46:59, 23 April 2013)
• File:HW1Solution.zip  + (03:26:08, 1 May 2013)
• File:Lab1.pdf  + (08:44:45, 6 May 2013)
• File:FinalProject.pdf  + (08:45:40, 6 May 2013)
• File:Set2.tar.gz  + (22:03:36, 6 May 2013)
• File:Sp2013 lab01 material.zip  + (23:31:46, 8 May 2013)
• Southern California Control Workshop, 10 May 2013  + (17:41:23, 9 May 2013)
• File:Tulip-planning 30Apr13.jpg  + (16:05:20, 12 May 2013)
• HYCON-EECI, Spring 2013  + (21:35:16, 12 May 2013)
• File:BugSlides.pdf  + (05:19:51, 22 May 2013)
• File:TangentBug.pdf  + (05:37:32, 22 May 2013)
• File:Tulip-planning 14May13.png  + (15:32:05, 27 May 2013)
• TuLiP planning, May 2013  + (15:33:29, 27 May 2013)
• File:Tulip-planning 23May13.png  + (15:33:44, 27 May 2013)
• CDS 202, Spring 2013  + (15:27:51, 2 June 2013)
• Rodolphe Sepulchre, June 2013  + (16:49:29, 3 June 2013)
• SURF 2013  + (00:48:39, 6 June 2013)
• ME/CS 132b, Spring 2013  + (21:34:24, 6 June 2013)
• Group Schedule, Spring 2013  + (14:08:34, 10 June 2013)
• Aurelijas lab book  + (17:21:36, 28 June 2013)
• File:Gel.27.06.jpg  + (18:35:13, 1 July 2013)
• File:Gel.27.06.sec.jpg  + (18:39:52, 1 July 2013)
• File:28.06.1to6.jpg  + (18:50:38, 1 July 2013)
• 06.26  + (18:55:11, 1 July 2013)
• 06.28  + (18:56:35, 1 July 2013)
• File:GoldenBraid Assembly 082713.png  + (19:59:04, 27 August 2013)
• September 2013 Meetings  + (15:56:56, 28 August 2013)
• File:Firstday data.xlsx  + (20:24:48, 28 August 2013)
• File:OverallfirstGenAssembly.png  + (23:35:35, 28 August 2013)
• Group Schedule, Summer 2013  + (19:08:33, 29 August 2013)
• File:Workday2 IFFL data 082713.xlsx  + (20:20:34, 29 August 2013)
• File:Workday3 IFFL data 082813.xlsx  + (20:22:00, 29 August 2013)
• File:TXTL e11 linear IFFL 082713.xlsx  + (22:25:05, 29 August 2013)
• File:TXTL e11 linear IFFL workshop test plasmid 082813.xlsx  + (22:26:16, 29 August 2013)
• TX-TL Workshop, Aug 2013  + (01:39:42, 30 August 2013)
• File:Workday4 IFFL in vivo data 082913.xlsx  + (17:49:13, 30 August 2013)
• TX-TL Workshop, Aug 2013: Detailed Schedule  + (19:52:55, 4 September 2013)
• Tom Ellis, September 2013  + (18:00:37, 12 September 2013)
• File:GAL-pathway.png  + (02:39:30, 1 October 2013)
• Picture Gallery  + (02:39:55, 1 October 2013)
• Marzia Cescon, Nov 2013  + (15:31:05, 2 November 2013)
• ACM 101/AM 125b/CDS 140a, Winter 2013  + (06:31:26, 11 November 2013)
• Travis Gibson, Nov 2013  + (19:10:15, 25 November 2013)
• Advising meetings, Dec 2013  + (21:36:30, 25 November 2013)
• Alex Mauroy, Nov 2013  + (01:48:02, 26 November 2013)
• Group Schedule, Fall 2013  + (22:25:38, 12 December 2013)
• File:Surf2014-ptolemy-triv-example.jpg  + (04:18:52, 21 December 2013)
• File:Surf2014-aes-rig2012.jpg  + (04:20:07, 21 December 2013)
• File:Surf2014-aes-schematic2012.png  + (04:20:36, 21 December 2013)
• SURF 2014: Switching control synthesis in the presence of uncertainty and general loads for an aircraft electric power system testbed  + (18:02:54, 21 December 2013)
• SURF 2014: Improved methods of discretization for temporal logic planning  + (18:25:59, 28 December 2013)
• File:Surf2014-polytope.png  + (18:26:21, 28 December 2013)
• SURF 2014: Rapid prototyping of moderate complexity biomolecular circuits  + (19:06:09, 28 December 2013)
• File:Surf2014 abstraction.png  + (18:41:13, 29 December 2013)
• File:Surf2014 keymaera train.png  + (18:43:52, 29 December 2013)
• File:Surf2014 partitioning.gif  + (19:08:58, 29 December 2013)
• File:Surf2014 partitioning small.gif  + (19:16:02, 29 December 2013)
• SURF 2014: Symbolic Verification of Nonlinear Hybrid Systems using Theorem Provers  + (19:26:33, 29 December 2013)
• File:SURF14 rhtlp subsets.png  + (08:30:39, 31 December 2013)
• File:SURF14 rhtlp roadnetwork.png  + (08:35:23, 31 December 2013)
• SURF 2014: Invariant Refinement for Receding Horizon Temporal Logic Planning  + (08:42:32, 31 December 2013)
• File:Cds140-wi14 hw1.pdf  + (22:32:43, 2 January 2014)
• File:14ChenEtAlMulticastIEEETIT2012.pdf  + (19:59:43, 8 January 2014)
• File:08LavaeiCircuits.pdf  + (20:04:28, 8 January 2014)
• File:06GaymeJFM2010.pdf  + (20:06:02, 8 January 2014)
• File:02-2007-FundamentalLimits.pdf  + (20:07:07, 8 January 2014)
• File:13SepsisJCritCareNihms300207.pdf  + (20:08:10, 8 January 2014)
• File:09ScienceGlycolyticOscOnlineFinal.pdf  + (20:09:53, 8 January 2014)
• File:11PhysOfFluidsForcedSolutions2011.pdf  + (20:11:29, 8 January 2014)
• File:10PNASOnlineFinalSackler2011.pdf  + (20:13:06, 8 January 2014)

• File:05AldersonDoyle-tsmca-July2010.pdf  + (20:15:00, 8 January 2014)

• File:03ScienceFire.pdf  + (20:16:01, 8 January 2014)
• File:04AMSNoticesInternet.pdf  + (20:16:53, 8 January 2014)
• File:01IEEEProcNetsLayeringAsOptDecomp.pdf  + (20:18:01, 8 January 2014)
• CDS 110b, Winter 2014- Course Material  + (20:28:18, 8 January 2014)
• File:InvertedPendulum classnote.pdf  + (20:39:06, 8 January 2014)
• File:CDS110bLect1.pdf  + (20:40:07, 8 January 2014)
• File:CDS110bLect1.pptx  + (20:41:04, 8 January 2014)
• CDS 110b: Robustness, fragility, complexity and control  + (20:46:18, 8 January 2014)
• CDS 110b, Winter 2014- Course Schedule  + (21:05:25, 8 January 2014)
• File:Cds110bwi14 hw1.pdf  + (03:01:27, 10 January 2014)
• File:Ln1.pdf  + (05:02:54, 22 January 2014)
• File:Cds140-wi14 hw3.pdf  + (17:56:42, 22 January 2014)
• File:Ln2.pdf  + (06:36:52, 24 January 2014)
• SURF discussions, Jan 2014  + (18:29:05, 24 January 2014)
• File:Cds110bwi14hw2.pdf  + (06:12:38, 27 January 2014)
• File:Cds140-wi14 hw4.pdf  + (06:10:20, 29 January 2014)
• Dennis Bernstein, Jan 2014  + (23:49:33, 29 January 2014)
• File:Cds140-wi14 hw5.pdf  + (16:40:03, 5 February 2014)
• CDS 140a Winter 2014 Homework 1  + (00:02:15, 10 February 2014)
• CDS 140a Winter 2014 Homework 2  + (00:02:34, 10 February 2014)
• File:Cds140-wi14 hw6.pdf  + (06:36:47, 12 February 2014)
• File:2HRVdetails.pdf  + (22:28:58, 14 February 2014)
• File:Main text.pdf  + (22:31:08, 14 February 2014)
• File:SI.PDF  + (22:33:33, 14 February 2014)
• File:Cds110bwi14 hw3.pdf  + (03:03:06, 22 February 2014)
• Cds110b WI14  + (03:04:09, 22 February 2014)
• File:Cds140-wi14 hw7.pdf  + (21:47:07, 22 February 2014)
• EECI 2013: Model Checking  + (18:03:13, 2 March 2014)
• EECI 2013: Algorithmic Verification of Hybrid Systems  + (18:04:11, 2 March 2014)
• EECI 2013: Computer Session: TuLiP  + (18:04:58, 2 March 2014)
• File:Cds140-wi14 hw8.pdf  + (18:42:00, 2 March 2014)
• File:Cds140-wi14 hw9.pdf  + (18:43:05, 2 March 2014)
• Art Krener, Mar 2014  + (16:14:06, 3 March 2014)
• Group Schedule, Winter 2014  + (03:19:40, 5 March 2014)
• CDS 140a Winter 2014 Homework 9  + (00:34:36, 7 March 2014)
• File:Be150 useful matlab.txt  + (22:53:18, 27 March 2014)
• File:Useful matlab1.txt  + (23:01:14, 27 March 2014)
• Raytheon visit, 3 Apr 2014  + (22:13:46, 29 March 2014)
• ACM 101b/AM 125b/CDS 140a, Winter 2014  + (16:25:58, 30 March 2014)
• File:Rec1 pos regdemo.sbproj.zip  + (21:31:28, 30 March 2014)
• File:ODE45 model pos reg.zip  + (21:38:21, 30 March 2014)
• File:Useful matlab.m.zip  + (21:40:13, 30 March 2014)
• Cheng-Zong Bai, Apr 2014  + (18:32:05, 31 March 2014)
• CDS 212 Fall 2010  + (03:46:17, 3 April 2014)
• File:CDS212MatlabV1.zip  + (16:14:04, 3 April 2014)
• File:Readme.txt  + (16:23:01, 3 April 2014)
• Sebastian Maerkl, Apr 2013  + (20:55:11, 6 April 2014)
• CDS 140b Spring 2014 Homework 2  + (16:34:53, 7 April 2014)
• File:YouCandidacy.pdf  + (01:03:10, 9 April 2014)
• File:Report siy.pdf  + (01:03:35, 9 April 2014)
• Information and Decision Systems  + (15:00:55, 11 April 2014)
• Ben Johnson, Apr 2014  + (23:55:58, 21 April 2014)
• File:TutorialSOS.pdf  + (18:08:17, 22 April 2014)
• File:DenniceLogisticsMandelbrot.pdf  + (18:10:27, 22 April 2014)
• File:MandNew.pptx  + (18:11:30, 22 April 2014)
• File:CtrlSysMagHelpSOS.pdf  + (18:13:53, 22 April 2014)
• CDS 140b Spring 2014 Homework 3  + (15:18:34, 27 April 2014)
• CDS course discussion, Apr 2014  + (00:15:32, 29 April 2014)
• CDS 140b Spring 2014 Homework 4  + (15:33:41, 30 April 2014)
• Gupta Visit  + (05:10:10, 6 May 2014)
• File:Chen-201405-CDS212.pdf  + (04:52:35, 8 May 2014)
• Cds212 SP14  + (04:56:33, 8 May 2014)
• CDS 140b Spring 2014 Homework 5  + (17:08:56, 8 May 2014)
• CDS 140b Spring 2014 Homework 6  + (19:49:38, 14 May 2014)
• BE 150/Bi 250 Spring 2014  + (21:10:01, 21 May 2014)
• BE 150/Bi 250 Spring 2014, Project presentation schedule  + (17:40:55, 28 May 2014)
• CDS 140b, Spring 2014  + (03:46:25, 1 June 2014)
• Group Schedule, Spring 2014  + (16:24:12, 2 June 2014)
• CDS 110b, Winter 2008  + (09:05:50, 9 June 2014)
• File:Zipper+Switch image.png  + (06:15:52, 10 June 2014)
• SURF 2014: Fabricating a Toolbox of RNA Thermometers  + (06:31:53, 10 June 2014)
• File:U0.PNG  + (08:28:31, 10 June 2014)
• File:U2.PNG  + (08:31:36, 10 June 2014)
• File:U6.PNG  + (08:33:18, 10 June 2014)
• File:U8.PNG  + (08:34:13, 10 June 2014)
• File:U9.PNG  + (08:34:30, 10 June 2014)
• File:Expression @ 30C and 37C pelleted.png  + (08:37:29, 10 June 2014)
• SURF 2014  + (06:17:22, 20 June 2014)
• TX-TL Workshop, Jun 2014  + (22:58:41, 21 June 2014)
• User:Vsinghal  + (18:56:30, 9 July 2014)
• Model reduction verification in TXTL, with Edward Hancock  + (22:17:48, 9 July 2014)
• Tomoaki Hashimoto, Aug 2014  + (03:22:21, 25 July 2014)
• Group Schedule, Summer 2014  + (08:26:25, 12 September 2014)
• Roy Fox, Oct 2014  + (18:41:52, 29 September 2014)
• File:Cds270lecture1.pdf  + (00:42:33, 2 October 2014)
• File:Cds270lecture2.pdf  + (23:48:24, 3 October 2014)
• George Haller, Oct 2014  + (22:40:58, 9 October 2014)
• File:Cds270lecture4.pdf  + (21:55:11, 13 October 2014)
• File:Cds2703.pdf  + (21:57:02, 13 October 2014)
• File:Cds2705.pdf  + (21:48:21, 14 October 2014)
• File:Cds2706.pdf  + (08:07:08, 16 October 2014)
• File:Cds2707.pdf  + (07:43:32, 21 October 2014)
• Laurent Lessard, 29 Oct 2014  + (02:03:12, 22 October 2014)
• File:Cds2708.pdf  + (19:16:19, 23 October 2014)
• File:Cds2709.pdf  + (16:02:13, 27 October 2014)
• File:Cds27010.pdf  + (05:38:08, 30 October 2014)
• File:Cabin.jpg  + (05:56:50, 31 October 2014)
• File:Nonheatedtent.jpg  + (05:57:29, 31 October 2014)
• File:Heatedtent.jpg  + (05:57:42, 31 October 2014)
• File:Cds27012.pdf  + (09:08:52, 6 November 2014)
• File:Cds27013.pdf  + (19:25:42, 11 November 2014)
• File:Cds27014.pdf  + (20:00:29, 13 November 2014)
• File:Cds27015.pdf  + (19:49:19, 18 November 2014)
• File:Handout.pdf  + (19:44:54, 20 November 2014)
• Group Schedule, Fall 2014  + (17:55:55, 4 December 2014)
• UG meetings, Fall 2014  + (09:13:46, 5 December 2014)
• Pre-CDC 2014 visitors  + (18:16:57, 6 December 2014)
• Douglas Griffith, 8 Dec 2014  + (00:14:05, 9 December 2014)
• Jin Ge, Dec 2014  + (04:08:59, 10 December 2014)
• File:Agent.png  + (22:22:19, 11 December 2014)
• Johan Thunberg, Dec 2014  + (17:53:01, 12 December 2014)
• SURF 2015: Quantitating Differences in Gene Expresion in Linear and Plasmid DNA in a Cell-Free Expression (TXTL) System  + (19:00:38, 16 December 2014)
• Yasuaki Wasa, Dec 2014  + (19:17:46, 16 December 2014)
• File:Juicebox-20130725.jpg  + (21:12:12, 18 December 2014)
• File:Juicebox-UI-20130726.png  + (21:18:13, 18 December 2014)
• File:Violacein.jpg  + (20:21:42, 19 December 2014)
• SURF 2015: Machine-readable protocols and rapid-prototyping for synthetic biology research  + (04:53:35, 22 December 2014)
• SURF 2015: Design space exploration of the violacein pathway in TX-TL  + (00:44:35, 23 December 2014)
• File:SURF15 RSE-Architecture.png  + (07:51:32, 24 December 2014)
• File:SURF15 Pioneer3-DX.jpg  + (07:54:12, 24 December 2014)
• SURF 2015: Improved State Estimation and Control of a Pioneer 3-DX for a Resilient Spacecraft Executive  + (13:53:05, 24 December 2014)
• File:Testbed-photograph-20141222-0833.jpg  + (16:20:09, 24 December 2014)
• SURF 2015: Formal synthesis of switching protocols for estimation and control of aircraft electric power systems  + (20:43:09, 25 December 2014)
• SURF 2015: Designing biomolecular temperature sensors  + (21:20:44, 27 December 2014)
• File:PBD.gif  + (23:55:29, 28 December 2014)