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List of results
- Population diversification in a yeast metabolic program promotes anticipation of environmental shifts + (05:18:55, 10 June 2016)
- Design and Implementation of a Biomolecular Circuit for Tracking Protein Concentration + (05:19:12, 10 June 2016)
- A hovercraft robot that uses insect-inspired visual autocorrelation for motion control in a corridor + (05:19:24, 10 June 2016)
- Bioligically Inspired Feedback Design for Drosophila Flight + (05:19:37, 10 June 2016)
- Design and implementation of a synthetic biomolecular concentration tracker + (05:21:19, 10 June 2016)
- Design and application of stationary phase combinatorial promoters + (05:52:05, 10 June 2016)
- Engineering Transcriptional Regulator Effector Specificity using Computational Design and In Vitro Rapid Prototyping: Developing a Vanillin Sensor + (05:52:24, 10 June 2016)
- Characterizing and Prototyping Genetic Networks with Cell-Free Transcription-Translation Reactions + (05:57:16, 10 June 2016)
- Category:NCS projects + (06:00:57, 10 June 2016)
- A Contract-Based Methodology for Aircraft Electric Power System Design + (06:06:44, 10 June 2016)
- Symbolic construction of GR(1) contracts for systems with full information + (06:06:52, 10 June 2016)
- Cross-entropy Temporal Logic Motion Planning + (06:07:00, 10 June 2016)
- Reactive Synthesis from Signal Temporal Logic Specifications + (06:07:10, 10 June 2016)
- Model Predictive Control for Signal Temporal Logic Specifications + (06:08:16, 10 June 2016)
- Property:Current project + (22:36:27, 10 June 2016)
- Category:Group member + (22:36:38, 10 June 2016)
- Property:Type + (22:43:12, 10 June 2016)
- Property:Department + (23:09:23, 10 June 2016)
- Property:Other projects + (01:35:51, 11 June 2016)
- Synthesis of Control Protocols for Autonomous Systems + (05:12:33, 11 June 2016)
- Property:Support + (11:43:27, 11 June 2016)
- Property:Agency + (11:43:37, 11 June 2016)
- Property:Title + (11:43:49, 11 June 2016)
- Property:Reports + (11:44:06, 11 June 2016)
- Category:Project + (11:44:27, 11 June 2016)
- Projects + (12:20:53, 11 June 2016)
- User:Murray + (12:51:36, 11 June 2016)
- Molecular Programming Project + (19:11:52, 11 June 2016)
- Property:Graduated + (20:16:59, 11 June 2016)
- Nancy Cao + (20:38:25, 11 June 2016)
- Miki Yun + (20:47:29, 11 June 2016)
- An analytical approach to bistable biological circuit discrimination using real algebraic geometry + (20:57:52, 11 June 2016)
- Rapid in vitro engineering of 16 two-input logic gates + (20:58:49, 11 June 2016)
- Finding stationary solutions to the chemical master equation by gluing state spaces at one or two states recursively + (21:01:35, 11 June 2016)
- Design of a Toolbox of RNA Thermometers + (21:02:00, 11 June 2016)
- Synthetic logic circuits using RNA aptamer against T7 RNA polymerase + (21:02:32, 11 June 2016)
- Synthetic circuit for exact adaptation and fold-change detection + (21:02:45, 11 June 2016)
- Sergei Avedisov, June 2016 + (17:33:05, 13 June 2016)
- Correct-by-Construction Synthesis of Control Protocols for Aerospace Systems + (15:08:26, 19 June 2016)
- File:CIDAR.png + (02:21:34, 22 June 2016)
- Moclo + (19:14:40, 29 June 2016)
- Aug 2016 meeting schedule + (17:59:22, 4 August 2016)
- Alice: An information-rich autonomous vehicle for high-speed desert navigation + (21:53:29, 20 August 2016)
- Group Schedule, Summer 2016 + (17:41:37, 19 September 2016)
- Sep/Oct 2016 meeting schedule + (03:22:36, 29 September 2016)
- Control design for hybrid systems with TuLiP: The temporal logic planning toolbox + (15:41:29, 17 October 2016)
- Connected Cruise Control Design Using Probabilistic Model Checking + (15:48:59, 17 October 2016)
- Quantifying Resource Competition and its Effects in the TX-TL System + (15:59:46, 17 October 2016)
- Admin/Projects + (16:12:22, 29 October 2016)
- Cell-Free Expression of Membrane Proteins with Applications to Drug Discovery + (16:52:28, 29 October 2016)
- Nov 2016 meeting schedule + (01:08:06, 11 November 2016)
- Improvement of E. coli transcription-translation (TX-TL) system + (15:54:12, 19 November 2016)
- Resilient Risk-Aware Autonomy for the Exploration of Uncertain and Extreme Environments + (23:09:56, 19 November 2016)
- Distributed Receding Horizon Control with Applications to Multi-Vehicle Formation Stabilization + (00:54:42, 27 November 2016)
- User:Sdathath + (12:19:46, 30 November 2016)
- Group Schedule, Fall 2016 + (06:10:19, 2 December 2016)
- IFAC 2014 Plenary Talk: Specification, Verification and Synthesis for Networked Control Systems + (19:28:16, 14 December 2016)
- SURF 2017: Scalable Robust Synthesis from Temporal Logic Specifications + (06:38:01, 21 December 2016)
- File:2017 integrase SURF RLW.pdf + (15:34:10, 2 January 2017)
- File:Integrase clock circuit.pdf + (16:31:09, 2 January 2017)
- File:Nsf integrase clock.png + (21:53:29, 2 January 2017)
- SURF 2017: Integrase based circuits for sequential and temporal control of gene expression + (01:47:11, 3 January 2017)
- SURF 2017: Length and time scales of cell-cell signalling circuits in agar + (00:17:22, 4 January 2017)
- Image gallery + (19:01:03, 5 January 2017)
- File:Bfs-overview.png + (19:01:43, 5 January 2017)
- File:Pmti11.png + (19:02:58, 5 January 2017)
- File:Muri11-synbio.png + (19:03:19, 5 January 2017)
- File:Afosr13-synbio.png + (19:03:34, 5 January 2017)
- File:Nsf13-mpp.png + (19:03:49, 5 January 2017)
- File:Icb13-synbio.png + (19:04:09, 5 January 2017)
- File:Hfsp15-oscillators.png + (19:04:28, 5 January 2017)
- File:Denso16-cpm.png + (19:04:47, 5 January 2017)
- File:Vehical-overview.png + (19:05:00, 5 January 2017)
- File:Kiss-architecture.png + (19:06:10, 5 January 2017)
- File:Breadboards-process.png + (19:06:19, 5 January 2017)
- File:Rate-regulator.png + (19:06:35, 5 January 2017)
- File:Biomolecular-twoloop.png + (19:06:46, 5 January 2017)
- File:Biomolecular-feedback.png + (19:06:55, 5 January 2017)
- File:Slowncs-arch.png + (19:07:06, 5 January 2017)
- File:Alice-gce.jpg + (19:10:55, 5 January 2017)
- File:Dod16-vbff.pdf + (23:03:59, 9 January 2017)
- SURF 2017 + (16:38:24, 11 January 2017)
- SURF 2017: Data-driven models for temporal logic control + (16:40:49, 11 January 2017)
- SURF 2017: Synthesizing flight software (FSW) discrete controllers from formal specifications + (16:51:27, 11 January 2017)
- File:TuLiP-SCA.png + (17:21:25, 11 January 2017)
- Synthesis of Control Protocols for Switched Electrical Power Systems for Commercial Applications with Safety Specifications + (03:25:10, 13 January 2017)
- Fast Automatic Verification of Large-Scale Systems with Lookup Tables + (03:35:09, 13 January 2017)
- Jan 2017 meeting schedule + (15:35:45, 17 January 2017)
- Michaëlle Mayalu, Jan 2017 + (16:35:23, 23 January 2017)
- Henrike Niederholtmeyer, Jan 2017 + (21:13:41, 24 January 2017)
- SURF discussions, Jan 2017 + (01:43:36, 25 January 2017)
- Leopold Green, 13 Feb 2017 + (21:57:19, 11 February 2017)
- Consensus and Cooperation in Networked Multi-Agent Systems + (15:26:02, 26 February 2017)
- Group Schedule, Winter 2017 + (21:10:01, 27 February 2017)
- Mar 2017 meeting schedule + (18:45:14, 5 March 2017)
- Repressing Integrase attachment site operation with CRISPR-Cas9 in E. coli + (05:56:00, 6 March 2017)
- Engineering pulsatile communication in bacterial consortia + (05:59:01, 6 March 2017)
- Enhancing tolerance to unexpected jumps in GR(1) games + (07:22:18, 22 March 2017)
- The Effect of Compositional Context on Synthetic Gene Networks + (07:41:04, 22 March 2017)
- Population regulation in microbial consortia using dual feedback control + (21:40:20, 22 March 2017)
- The role of single occupancy effects on integrase dynamics in a cell-free system + (06:00:40, 28 March 2017)
- AFOSR BRI, DARPA BioCon + (06:07:20, 28 March 2017)
- SRC TerraSwarm, DENSO CPM + (04:33:48, 17 April 2017)
- Hiding variables when decomposing specifications into GR(1) contracts + (04:42:48, 17 April 2017)
- Apr 2017 meeting schedule + (15:25:22, 19 April 2017)
- SURF 2017: Genetically-Programmed Synthetic Cells and Multi-Cellular Machines + (19:55:08, 1 May 2017)
- Group Schedule, Spring 2017 + (17:59:21, 8 May 2017)
- May 2017 meeting schedule + (00:41:57, 15 May 2017)
- Gabor Stepan, 30 May 2017 + (16:19:18, 30 May 2017)
- Learning-Based Abstractions for Nonlinear Constraint Solving + (17:09:48, 23 July 2017)
- Synthesis of Correct-by-Construction Behavior Trees + (17:16:30, 23 July 2017)
- Quantitative Modeling of Integrase Dynamics Using a Novel Python Toolbox for Parameter Inference in Synthetic Biology + (14:38:40, 31 July 2017)
- Group Schedule, Summer 2017 + (14:26:05, 28 August 2017)
- System-level studies of a cell-free transcription-translation platform for metabolic engineering + (05:37:33, 4 September 2017)
- A Bayesian approach to inferring chemical signal timing and amplitude in a temporal logic gate using the cell population distributional response + (14:47:53, 4 September 2017)
- File:Duncan bozenna.jpg + (02:53:29, 25 September 2017)
- Decomposing GR(1) Games with Singleton Liveness Guarantees for Efficient Synthesis + (03:10:08, 25 September 2017)
- An In Silico Modeling Toolbox for Rapid Prototyping of Circuits in a Biomolecular “Breadboard” System + (03:13:30, 25 September 2017)
- Bozenna Pasik-Duncan, Sep 2017 + (03:59:20, 27 September 2017)
- File:Karan Kalsi.jpg + (16:28:03, 28 September 2017)
- Karan Kalsi, Oct 2017 + (21:54:58, 3 October 2017)
- UTRC visit, 12 Oct 2017 + (22:13:09, 11 October 2017)
- WASP visit, 16-17 Oct 2017 + (05:26:20, 12 October 2017)
- Mary Dunlop, Oct 2017 + (13:46:54, 20 October 2017)
- Resource Competition as a Source of Non-Minimum Phase Behavior in Transcription-Translation Systems + (14:29:49, 29 October 2017)
- Analysis and design of a synthetic transcriptional network for exact adaptation + (14:30:30, 29 October 2017)
- Quantifying Crosstalk in Biochemical Systems + (14:30:39, 29 October 2017)
- Feedback architectures to regulate flux of components in artificial gene networks + (14:30:48, 29 October 2017)
- File:Jpl-pdf17.png + (21:24:00, 11 November 2017)
- File:Ncs-hierarchical.png + (18:16:05, 12 November 2017)
- Group Schedule, Fall 2017 + (06:34:49, 4 December 2017)
- UG meetings, Fall 2017 + (14:04:08, 5 December 2017)
- SURF 2018: Experimental verification of a semi-autonomous vehicle design based on human intention + (17:26:23, 8 December 2017)
- File:AVP.png + (20:21:24, 8 December 2017)
- File:AVP contracts.png + (20:21:58, 8 December 2017)
- SURF 2018: Resource Usage in TX-TL + (22:00:20, 11 December 2017)
- CS 142, Fall 2017 + (18:12:30, 13 December 2017)
- File:ASS DNAPEN.jpg + (02:01:51, 14 December 2017)
- SURF 2018: Integrase-based genetic circuits + (02:02:59, 14 December 2017)
- SURF 2018: Evolutionary Stability of Genetic Circuits + (21:54:58, 15 December 2017)
- SURF 2017: Synthetic modules for control of bacterial growth + (00:14:25, 16 December 2017)
- SURF 2018: Synthetic modules for regulation of bacterial growth + (00:15:10, 16 December 2017)
- SURF 2018: Test design for temporal logic controllers + (07:06:57, 16 December 2017)
- File:PARADOX.jpg + (22:35:40, 16 December 2017)
- SURF 2018: Modeling the Effect of Intracellular Signaling Mechanisms on Population Dynamic Behaviors in the Context of Paradoxical Signaling + (22:50:16, 16 December 2017)
- SURF 2018: Engineering metabolic cross-feeding relationships for robust microbial consortia + (15:58:04, 18 December 2017)
- SURF 2018: Contract-based Design of Control Systems + (07:00:13, 19 December 2017)
- Synthesizing flight software (FSW) discrete controllers from formal specifications + (06:39:31, 22 December 2017)
- Model-guided Discovery and Optimization of Cell-based Sensors + (06:39:47, 22 December 2017)
- File:Icb-microbial.png + (17:35:39, 1 January 2018)
- SURF 2018 + (19:45:10, 3 January 2018)
- SURF discussions, Jan 2018 + (08:01:32, 24 January 2018)
- EECI 2013: Automata Theory + (01:15:50, 25 January 2018)
- Distributed Mission and Contingency Management for the DARPA Urban Challenge + (06:57:31, 29 January 2018)
- UG meetings, Winter 2018 + (00:09:24, 23 February 2018)
- John McManus, 5 Mar 2018 + (21:37:15, 3 March 2018)
- Group Schedule, Winter 2018 + (05:29:00, 6 March 2018)
- Emzo de los Santos, 12 Mar 2018 + (05:18:10, 8 March 2018)
- Chelsea Hu, Apr 2018 + (19:53:17, 9 April 2018)
- Ben Richards, 20 Apr 2018 + (15:35:58, 17 April 2018)
- Stochastic systems courses + (17:26:50, 2 May 2018)
- Siva Seetharaman, 10 May 2018 + (20:12:52, 9 May 2018)
- CDS 110, Spring 2018 + (23:05:42, 19 May 2018)
- UG meetings, Spring 2018 + (17:33:28, 5 June 2018)
- Control of bacterial population density with population feedback and molecular sequestration + (04:54:08, 19 June 2018)
- Modeling Dynamic Transcriptional Circuits with CRISPRi + (05:04:54, 19 June 2018)
- Single day construction of multi-gene circuits with 3G assembly + (05:10:34, 19 June 2018)
- Long-distance communication in synthetic bacterial consortia through active signal propagation + (05:12:26, 19 June 2018)
- Voluntary lane-change policy synthesis with reactive control improvisation + (05:25:18, 19 June 2018)
- Optimal Experiment Design and Leveraging Competition for Shared Resources in Cell-free Extracts + (05:31:09, 19 June 2018)
- Length and time scales of cell-cell signaling circuits in agar + (13:59:02, 14 July 2018)
- On-chip membrane protein cell-free expression enables development of a direct binding assay: A curious case of potassium channel KcsA-Kv1.3 + (05:46:37, 15 July 2018)
- Temporal Logic Control of POMDPs via Label-based Stochastic Simulation Relations + (05:56:57, 15 July 2018)
- Wenlong Xu, 14 Aug 2018 + (06:49:43, 12 August 2018)
- File:Murray-14Dec16.jpg + (17:26:57, 8 September 2018)
- Group Schedule, Spring 2018 + (18:16:39, 8 September 2018)
- Group Schedule, Summer 2018 + (20:45:43, 10 September 2018)
- Small comments on papers + (01:19:18, 21 September 2018)
- Daniel Fremont, Sep 2018 + (21:00:11, 21 September 2018)
- Toward Specification-Guided Active Mars Exploration for Cooperative Robot Teams + (13:46:29, 26 September 2018)
- Cell-Free Extract Data Variability Reduction in the Presence of Structural Non-Identifiability + (13:46:45, 26 September 2018)
- A modal interface contract theory for guarded input/output automata with an application in traffic system design + (05:46:14, 8 October 2018)
- Risk-aware motion planning for automated vehicle among human-driven cars + (05:49:28, 8 October 2018)
- File:Buildacell.png + (05:56:49, 8 October 2018)
- Bode Lecture 2016: Future Directions in Control: A Look Backwards and Forwards + (00:16:31, 23 October 2018)
- Group Schedule, Fall 2018 + (07:51:45, 27 November 2018)
- File:Triple int.png + (00:08:58, 28 November 2018)
- File:Double int.png + (00:09:10, 28 November 2018)
- File:N integrator.png + (00:19:45, 28 November 2018)
- SURF 2019: Geometry of Control-Invariant Sets + (03:40:16, 28 November 2018)
- Paul Van den Hof, Dec 2018 + (06:47:11, 7 December 2018)
- File:3-node Message Routing figure.png + (18:33:08, 10 December 2018)
- File:Message Routing Schematic.png + (18:58:14, 10 December 2018)
- SURF 2019: Engineering a synthetic high-bandwidth intercellular communication system through plasmid conjugation + (23:12:23, 10 December 2018)
- UG meetings, Fall 2018 + (01:23:38, 11 December 2018)
- CDS 131, Fall 2018 + (15:28:18, 11 December 2018)
- SURF 2019: Modeling and Analysis on Robust Synthetic Consortia with Localized Functions + (01:15:39, 12 December 2018)
- File:ADH evo stability.png + (03:02:29, 12 December 2018)
- SURF 2019: Evolutionary Stability of Genetic Circuits + (03:18:51, 12 December 2018)
- File:Aicb19-fieldprogrammable.png + (22:27:01, 25 December 2018)
- File:Arl19-cellfree.png + (22:47:08, 25 December 2018)
- File:Arl19-hybrid.png + (22:57:35, 25 December 2018)
- File:Arl19-zebrafish.png + (23:08:35, 25 December 2018)
- SURF 2019 + (05:02:19, 26 December 2018)
- SURF 2019: River Mapping with Autonomous Surface Vehicles for Flood Hazard Monitoring + (05:07:37, 26 December 2018)
- File:Thor-setup.png + (05:08:47, 26 December 2018)
- Robust Estimation Framework with Semantic Measurements + (05:12:36, 27 December 2018)
- End-to-End Safe Reinforcement Learning through Barrier Functions for Safety-Critical Continuous Control Tasks + (05:18:35, 27 December 2018)
- Inverse Abstraction of Neural Networks Using Symbolic Interpolation + (05:21:34, 27 December 2018)
- Model of Paradoxical Signaling Regulated T-Cell Population Control for Design of Synthetic Circuits + (05:30:38, 27 December 2018)
- Cooperation Enhances Robustness of Coexistence in Spatially Structured Consortia + (05:33:33, 27 December 2018)
- Role of interaction network topology in controlling microbial population in consortia + (05:39:02, 27 December 2018)
- Hard Limits And Performance Tradeoffs In A Class Of Sequestration Feedback Systems + (05:42:27, 27 December 2018)
- File:Darpa-biocon.png + (05:56:49, 27 December 2018)
- ICB Microbial, ICB Network19 + (05:12:02, 2 January 2019)
- Alex White + (05:17:48, 2 January 2019)
- Andrew Montequin + (05:25:00, 2 January 2019)
- Jonathan Feldstein + (05:27:52, 2 January 2019)
- Lani Kim + (05:44:09, 2 January 2019)
- SURF 2019: Synthetic modules for regulation of bacterial growth + (00:19:52, 15 January 2019)
- Timing molecular motion and production with a synthetic transcriptional clock + (16:05:51, 19 January 2019)
- User:Admin/Papers + (16:11:11, 19 January 2019)
- Engineering Transcriptional Regulator Effector Specificity Using Computational Design and In Vitro Rapid Prototyping: Developing a Vanillin Sensor + (16:15:08, 19 January 2019)
- Biophysical Constraints Arising from Compositional Context in Synthetic Gene Networks + (15:54:27, 26 January 2019)
- Recursively constructing analytic expressions for equilibrium distributions of stochastic biochemical reaction networks + (15:54:42, 26 January 2019)
- Cell-free and in vivo characterization of Lux, Las, and Rpa quorum activation systems in E. coli + (15:54:55, 26 January 2019)
- Rapid cell-free forward engineering of novel genetic ring oscillators + (15:55:15, 26 January 2019)
- Sara Molinari, 29 Jan 2019 + (00:17:21, 30 January 2019)
- Ather Gattami, Feb 2019 + (18:58:23, 19 February 2019)
- Elahe Aghapour, Feb 2019 + (21:09:03, 19 February 2019)
- Group Schedule, Winter 2019 + (16:42:16, 11 March 2019)
- Temporal Logic Control of Switched Affine Systems with an Application in Fuel Balancing + (20:05:02, 29 March 2019)
- Kristin Rozier, May 2019 + (16:08:15, 17 May 2019)
- File:Nsf19-cellfree.png + (04:22:55, 21 May 2019)
- File:Arl20-elm.png + (04:39:26, 21 May 2019)
- UG meetings, Spring 2019 + (05:59:33, 6 June 2019)
- Control Theory for Synthetic Biology: Recent Advances in System Characterization, Control Design, and Controller Implementation for Synthetic Biology + (20:14:14, 8 June 2019)
- Layering assume-guarantee contracts for hierarchical system design + (20:15:24, 8 June 2019)
- Addressable, “Packet-Based” Intercellular Communication through Plasmid Conjugation + (23:47:25, 9 June 2019)
- Proof of concept continuous event logging in living cells + (23:49:07, 9 June 2019)
- Quantitative characterization of random partitioning in the evolution of plasmid-encoded traits + (23:50:50, 9 June 2019)
- Control of density and composition in an engineered two-member bacterial community + (00:03:42, 10 June 2019)
- Design of a genetic layered feedback controller in synthetic biological circuitry + (00:09:38, 10 June 2019)
- Bacterial Controller Aided Wound Healing: A Case Study in Dynamical Population Controller Design + (00:11:27, 10 June 2019)
- File:Assured-autonomy.png + (04:20:45, 10 June 2019)
- File:Afosr-testandeval.png + (04:29:43, 10 June 2019)
- Group Schedule, Spring 2019 + (16:09:38, 10 June 2019)
- Analysis of primitive genetic interactions for the design of a genetic signal differentiator + (00:13:46, 17 June 2019)
- Stanley Bak, 8 July 2019 + (13:50:59, 8 July 2019)
- Towards Assume-Guarantee Profiles for Autonomous Vehicles + (16:22:34, 1 August 2019)
- Synthetic biology future applications and technology needs + (00:41:08, 27 August 2019)