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This page provides a simple browsing interface for finding entities described by a property and a named value. Other available search interfaces include the page property search, and the ask query builder.

List of results

• Data-driven network models for genetic circuits from time-series data with incomplete measurements  + (2021m)
• How to model DNA replication in stochastic models of synthetic genetic circuits (and why)  + (2021n)
• Risk-Averse Decision Making Under Uncertainty  + (2021n)
• Metabolic engineering of Pseudomonas putida for production of vanillylamine from lignin-derived substrates  + (2021x_)
• Robustness guarantees for structured model reduction of dynamical systems with applications to biomolecular models  + (2022a)
• Towards Better Test Coverage: Merging Unit Tests for Autonomous Systems  + (2022b)
• From Specification to Implementation: Assume-Guarantee Contracts for Synthetic Biology  + (2022b)
• Robust Safe Control Synthesis with Disturbance Observer-Based Control Barrier Functions  + (2022b)
• Evaluation Metrics for Object Detection for Autonomous Systems  + (2022c)
• Layered Feedback Control Overcomes Performance Trade-Off in Synthetic Biomolecular Networks  + (2022d)
• Synthesizing Reactive Test Environments for Autonomous Systems: Testing Reach-Avoid Specifications with Multi-Commodity Flows  + (2022d)
• Fast and flexible simulation and parameter estimation for synthetic biology using bioscrape  + (2022k)
• Integrase-mediated differentiation circuits improve evolutionary stability of burdensome and toxic functions in E. coli  + (2022k)
• Minimally Constrained Testing for Autonomy with Temporal Logic Specifications  + (2022m)
• Characterization of Integrase and Excisionase Activity in Cell-free Protein Expression System Using a Modeling and Analysis Pipeline  + (2022n)
• BioCRNpyler: Compiling chemical reaction networks from biomolecular parts in diverse contexts  + (2022o)
• Reasoning over Test Specifications using Assume-Guarantee Contracts  + (2023a)
• Barrier-Based Test Synthesis for Safety-Critical Systems Subject to Timed Reach-Avoid Specifications  + (2023a)
• Context-Aided Variable Elimination for Requirement Engineering  + (2023a)
• Evaluation Metrics of Object Detection for Quantitative System-Level Analysis of Autonomous Systems  + (2023b)
• A Model-Free Algorithm for Extremely Resilient Navigation  + (2023c)
• A 65nm CMOS Living-Cell Dynamic Fluorescence Sensor with 1.05fA Sensitivity at 600/700nm Wavelengths  + (2023c)
• Control education for societal-scale challenges: A community roadmap  + (2023c)
• Metabolic perturbations to an E. coli-based cell-free system reveal a trade-off between transcription and translation  + (2023c)
• Addressable and adaptable intercellular communication via DNA messaging  + (2023d)

• Development of cell-free transcription-translation systems in three soil Pseudomonads  + (2023f)

• Pacti: Scaling Assume-Guarantee Reasoning for System Analysis and Design  + (2023h)
• A chemical reaction network model of PURE  + (2023h)
• Efficient local validation of partially ordered models via Baysian directed sampling  + (2023i)
• Engineering the soil bacterium Pseudomonas synxantha 2-79 into a ratiometric bioreporter for phosphorus limitation  + (2023j)
• TRILL: Orchestrating Modular Deep-Learning Workflows for Democratized, Scalable Protein Analysis and Engineering  + (2023k)
• Optimizing protein expression in the One-Pot PURE system: Insights into reaction composition and translation efficiency  + (2024a)
• A Field-Deployable Arsenic Sensor Integrating Bacillus Megaterium with CMOS Technology  + (2024b)
• Specifying and Analyzing Networked and Layered Control Systems Operating on Multiple Clocks  + (2024c)
• Impact of Chemical Dynamics of Commercial PURE Systems on Malachite Green Aptamer Fluorescence  + (2024d)
• Flow-Based Synthesis of Reactive Tests for Discrete Decision-Making Systems with Temporal Logic Specifications  + (2024e)
• Theory-Based Engineering of Biomolecular Circuits in Living Cells  + (AFOSR BRI)
• Rules of Composition in Synthetic Biology Across Scales of Complexity: Theory and Tools  + (AFOSR Syn Bio MURI)
• Formal Methods for V&V and T&E of Autonomous Systems  + (AFOSR T&E)
• Layered T&E for Safety-Critical Autonomous Systems  + (AFOSR T&E2)
• Field-Programmable, Recombinase-Based Biomolecular Circuits  + (AICB MRSB)
• Engineering Durable Cell-Free Biological Capabilities for Advanced Sensing and Prototyping  + (ARL cellfree)
• Enabling Technologies for Cell-Silicon Interfacing  + (ARL19 hybrid)
• Fundamental Biological Factors Underlying Human Performance: From Molecular Diagnostics and Detection to Behavior and Systems Biology  + (ARL19 zebrafish)
• Center for Harnessing Microbiota from Military Environments (CHARMME)  + (ARO CHARMME)
• Dissecting microbiome-gut-brain circuits for microbial modulation of host cognition in response to diet and stress  + (ARO GMB)
• Biomolecular Circuits for Rapid Detection and Response to Environmental Events  + (ARO ICB)
• Cell-Free Expression of Membrane Proteins with Applications to Drug Discovery  + (Amgen TX-TL)
• Deciphering the Rules of Nucleus Architecture with Synthetic Cells and Organelles  + (BBSRC SynNucleus)
• Correct-by-Construction Synthesis of Control Protocols for Aerospace Systems  + (Boeing)
• Improvement of E. coli transcription-translation (TX-TL) system  + (Caltech Grubstake)