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List of results
- From Specification to Implementation: Assume-Guarantee Contracts for Synthetic Biology +
- Synthesis of Static Test Environments for Observing Sequence-like Behaviors in Autonomous Systems +
- Analysis of Circuits for Dosage Control in Microbial Populations +
- Control of density and composition in an engineered two-member bacterial community +
- Towards Better Test Coverage: Merging Unit Tests for Autonomous Systems +
- Risk-Averse Decision Making Under Uncertainty +
- Formal Test Synthesis for Safety-Critical Autonomous Systems based on Control Barrier Functions +
- Control design for hybrid systems with TuLiP: The temporal logic planning toolbox +
- Analysis of primitive genetic interactions for the design of a genetic signal differentiator +
- Robust Safe Control Synthesis with Disturbance Observer-Based Control Barrier Functions +
- Experiments in Planar Manipulation and Grasping +
- Layered Feedback Control Overcomes Performance Trade-Off in Synthetic Biomolecular Networks +
- Model Predictive Control for Signal Temporal Logic Specifications +
- Inverse Abstraction of Neural Networks Using Symbolic Interpolation +
- Biophysical Constraints Arising from Compositional Context in Synthetic Gene Networks +
- Layered Feedback Control Improves Robust Functionality across Heterogeneous Cell Populations +
- Guidelines for Designing the Antithetic Feedback Motif +
- Learning pose estimation for UAV autonomous navigation and landing using visual-inertial sensor data +
- A Method for Cost-Effective and Rapid Characterization of Genetic Parts +
- Applications and Extensions of Goursat Normal Form to Control of Nonlinear Systems +
- Population regulation in microbial consortia using dual feedback control +
- Intermittent Connectivity for Exploration in Communication-Constrained Multi-Agent Systems +
- Geometric Approaches to Control in the Presence of Magnitude and Rate Saturations +
- Limits of probabilistic safety guarantees when considering human uncertainty +
- Failure-Tolerant Contract-Based Design of an Automated Valet Parking System using a Directive-Response Architecture +
- Fast Automatic Verification of Large-Scale Systems with Lookup Tables +
- A two-state ribosome and protein model can robustly capture the chemical reaction dynamics of gene expression +
- BioCRNpyler: Compiling chemical reaction networks from biomolecular parts in diverse contexts +
- An analytical approach to bistable biological circuit discrimination using real algebraic geometry +
- Synthesis of Control Protocols for Switched Electrical Power Systems for Commercial Applications with Safety Specifications +
- Quantitative characterization of random partitioning in the evolution of plasmid-encoded traits +
- How to model DNA replication in stochastic models of synthetic genetic circuits (and why) +
- Cell-free and in vivo characterization of Lux, Las, and Rpa quorum activation systems in E. coli +
- Bacterial Controller Aided Wound Healing: A Case Study in Dynamical Population Controller Design +
- Synthetic mammalian signaling circuits for robust cell population control +
- Future Directions in Control, Dynamics, and Systems: Overview, Grand Challenges, and New Courses +
- Nonlinear Control of Mechanical Systems: A Lagrangian Perspective +
- Robustness guarantees for structured model reduction of dynamical systems with applications to biomolecular models +
- Design of a genetic layered feedback controller in synthetic biological circuitry +
- Synthesis of Correct-by-Construction Behavior Trees +
- A geometric and structural approach to the analysis and design of biological circuit dynamics: a theory tailored for synthetic biology +
- Trajectory Generation for a Towed Cable System using Differential Flatness +
- Assessment of Robustness to Temperature in a Negative Feedback Loop and a Feedforward Loop +
- Length and time scales of cell-cell signaling circuits in agar +
- Risk-aware motion planning for automated vehicle among human-driven cars +
- Synthesizing Reactive Test Environments for Autonomous Systems: Testing Reach-Avoid Specifications with Multi-Commodity Flows +
- The role of single occupancy effects on integrase dynamics in a cell-free system +
- The Python Control Systems Library (python-control) +
- Towards Assume-Guarantee Profiles for Autonomous Vehicles +
- Time-Optimal Navigation in Uncertain Environments with High-Level Specifications +
- Engineering Logical Inflammation Sensing Circuit for Modulating Gut Conditions +
- Model Reduction Tools For Phenomenological Modeling of Input-Controlled Biological Circuits +
- A Method for Cost-Effective and Rapid Characterization of Engineered T7-based Transcription Factors by Cell-Free Protein Synthesis Reveals Insights into the Regulation of T7 RNA Polymerase-Driven Expression +
- Robustness Guarantees for Structured Model Reduction of Dynamical Systems +
- End-to-End Safe Reinforcement Learning through Barrier Functions for Safety-Critical Continuous Control Tasks +
- Recursively constructing analytic expressions for equilibrium distributions of stochastic biochemical reaction networks +
- Robust Estimation Framework with Semantic Measurements +
- An In Silico Modeling Toolbox for Rapid Prototyping of Circuits in a Biomolecular “Breadboard” System +
- Reactive motion planning with probabilistic safety guarantees +
- Geometric Phases, Control Theory, and Robotics +
- Data-driven network models for genetic circuits from time-series data with incomplete measurements +
- Tunable integrase-mediated differentiation facilitates improved output of burdensome functions in E. coli +
- Theoretical Design of Paradoxical Signaling-Based Synthetic Population Control Circuit in E. coli +
- Risk-Averse Planning Under Uncertainty +
- Rules of the Road: Safety and Liveness Guarantees for Autonomous Vehicles +
- Real-Time Control Experiments for Instruction and Research at Caltech +
- A MATLAB toolbox for modeling genetic circuits in cell-free systems +
- System-level studies of a cell-free transcription-translation platform for metabolic engineering +
- Proof of concept continuous event logging in living cells +
- Robotic Control and Nonholonomic Motion Planning +
- A population-based temporal logic gate for timing and recording chemical events +
- Counter-example Guided Learning of Bounds on Environment Behavior +
- Modeling predicts that CRISPR-based activators, unlike CRISPR-based repressors, scale well with increasing gRNA competition and dCas9 bottlenecking +
- An automated model reduction tool to guide the design and analysis of synthetic biological circuits +
- Addressable, “Packet-Based” Intercellular Communication through Plasmid Conjugation +
- Bistable State Switch Enables Ultrasensitive Feedback Control in Heterogeneous Microbial Populations +
- Construction of an inducible amyloid expression circuit in Bacillus megaterium: A case study with CsgA and TasA +
- Evaluation Metrics for Object Detection for Autonomous Systems +
- Characterization of Integrase and Excisionase Activity in Cell-free Protein Expression System Using a Modeling and Analysis Pipeline +
- Minimally Constrained Testing for Autonomy with Temporal Logic Specifications +
- Barrier-Based Test Synthesis for Safety-Critical Systems Subject to Timed Reach-Avoid Specifications +
- Context-Aided Variable Elimination for Requirement Engineering +
- A 65nm CMOS Living-Cell Dynamic Fluorescence Sensor with 1.05fA Sensitivity at 600/700nm Wavelengths +
- Control education for societal-scale challenges: A community roadmap +
- Pacti: Scaling Assume-Guarantee Reasoning for System Analysis and Design +
- Development of cell-free transcription-translation systems in three soil Pseudomonads +
- A chemical reaction network model of PURE +
- Engineering the soil bacterium Pseudomonas synxantha 2-79 into a ratiometric bioreporter for phosphorus limitation +
- TRILL: Orchestrating Modular Deep-Learning Workflows for Democratized, Scalable Protein Analysis and Engineering +
- Specifying and Analyzing Networked and Layered Control Systems Operating on Multiple Clocks +
- Impact of Chemical Dynamics of Commercial PURE Systems on Malachite Green Aptamer Fluorescence +
- Flow-Based Synthesis of Reactive Tests for Discrete Decision-Making Systems with Temporal Logic Specifications +
