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List of results
- An analytical approach to bistable biological circuit discrimination using real algebraic geometry + (Journal paper)
- A population-based temporal logic gate for timing and recording chemical events + (Journal paper)
- Biophysical Constraints Arising from Compositional Context in Synthetic Gene Networks + (Journal paper)
- Recursively constructing analytic expressions for equilibrium distributions of stochastic biochemical reaction networks + (Journal paper)
- Cell-free and in vivo characterization of Lux, Las, and Rpa quorum activation systems in E. coli + (Journal paper)
- Layering assume-guarantee contracts for hierarchical system design + (Journal paper)
- Control Theory for Synthetic Biology: Recent Advances in System Characterization, Control Design, and Controller Implementation for Synthetic Biology + (Journal paper)
- On-chip membrane protein cell-free expression enables development of a direct binding assay: A curious case of potassium channel KcsA-Kv1.3 + (Journal paper)
- Engineering Transcriptional Regulator Effector Specificity Using Computational Design and In Vitro Rapid Prototyping: Developing a Vanillin Sensor + (Journal paper)
- Assessment of Robustness to Temperature in a Negative Feedback Loop and a Feedforward Loop + (Journal paper)
- A MATLAB toolbox for modeling genetic circuits in cell-free systems + (Journal paper)
- Guidelines for Designing the Antithetic Feedback Motif + (Journal paper)
- Data-driven network models for genetic circuits from time-series data with incomplete measurements + (Journal paper)
- Robustness guarantees for structured model reduction of dynamical systems with applications to biomolecular models + (Journal paper)
- Layered Feedback Control Overcomes Performance Trade-Off in Synthetic Biomolecular Networks + (Journal paper)
- Metabolic engineering of Pseudomonas putida for production of vanillylamine from lignin-derived substrates + (Journal paper)
- BioCRNpyler: Compiling chemical reaction networks from biomolecular parts in diverse contexts + (Journal paper)
- Barrier-Based Test Synthesis for Safety-Critical Systems Subject to Timed Reach-Avoid Specifications + (Journal paper)
- Fast and flexible simulation and parameter estimation for synthetic biology using bioscrape + (Journal paper)
- Rules of the Road: Safety and Liveness Guarantees for Autonomous Vehicles + (Journal paper)
- Control education for societal-scale challenges: A community roadmap + (Journal paper)
- Development of cell-free transcription-translation systems in three soil Pseudomonads + (Journal paper)
- Engineering the soil bacterium Pseudomonas synxantha 2-79 into a ratiometric bioreporter for phosphorus limitation + (Journal paper)
- Addressable and adaptable intercellular communication via DNA messaging + (Journal paper)
- Integrase-mediated differentiation circuits improve evolutionary stability of burdensome and toxic functions in E. coli + (Journal paper)
- A Field-Deployable Arsenic Sensor Integrating Bacillus Megaterium with CMOS Technology + (Journal paper)
- Impact of Chemical Dynamics of Commercial PURE Systems on Malachite Green Aptamer Fluorescence + (Journal paper)
- Flow-Based Synthesis of Reactive Tests for Discrete Decision-Making Systems with Temporal Logic Specifications + (Journal paper)
- The effects of time-varying temperature on delays in genetic networks + (Journal submission)
- Bootstrapping bilinear models of simple vehicles + (Journal submission)
- Convex Optimal Uncertainty Quantification + (Journal submission)
- Specification and Synthesis of Reactive Protocols for Aircraft Electric Power Distribution + (Journal submission)
- Synthesis of Control Protocols for Autonomous Systems + (Journal submission)
- Cone Invariance and Rendezvous of Multiple Agents + (Journal submission)
- State Estimation Over Packet Dropping Networks Using Multiple Description Coding + (Journal submission)
- On a Stochastic Sensor Selection Algorithm with Applications in Sensor Scheduling and Sensor Coverage + (Journal submission)
- Receding Horizon Control of a Vectored Thrust Flight Experiment + (Journal submission)
- Model Reduction for Compressible Flows using POD and Galerkin Projection + (Journal submission)
- Model Predictive Control for Signal Temporal Logic Specifications + (Journal submission)
- The Effect of Compositional Context on Synthetic Gene Networks + (Journal submission)
- A Method for Cost-Effective and Rapid Characterization of Engineered T7-based Transcription Factors by Cell-Free Protein Synthesis Reveals Insights into the Regulation of T7 RNA Polymerase-Driven Expression + (Journal submission)
- Analysis of primitive genetic interactions for the design of a genetic signal differentiator + (Journal submission)
- Synthetic mammalian signaling circuits for robust cell population control + (Journal submission)
- Characterization of Integrase and Excisionase Activity in Cell-free Protein Expression System Using a Modeling and Analysis Pipeline + (Journal submission)
- Pacti: Scaling Assume-Guarantee Reasoning for System Analysis and Design + (Journal submission)
- A Method for Cost-Effective and Rapid Characterization of Genetic Parts + (Journal submissions)
- Delay-dependent Stability of Genetic Regulatory Networks + (MS thesis)
- Future Directions in Control in an Information-Rich World + (Magazine article)
- Appealing to a Non-traditional Audience: A New Approach to Teaching Feedback + (Magazine article)
- Distributed Computation for Cooperative Control + (Magazine submission)
- Experiments in Planar Manipulation and Grasping + (Masters Report)
- Rapid prototyping of biomolecular circuits through module characterization in cell-free expression systems + (Masters Thesis)
- On Measures of Non-Integrability of Pfaffian Systems + (Paper)
- Modeling and Control of Epitaxial Thin Film Growth + (Ph.D. Dissertation)
- Distributed Gradient Systems and Dynamic Coordination + (PhD Dissertation)
- Bio-Inspired Visuomotor Convergence in Navigation and Flight Control Systems + (PhD Dissertation)
- Coarse analysis of multiscale systems: diffuser flows, charged particle motion, and connections to averaging theory + (PhD Dissertation)
- State Estimation in Multi-Agent Decision and Control Systems + (PhD Dissertation)
- Real-Time Optimal Trajectory Generation for Constrained Dynamical Systems + (PhD Dissertation)
- Effects of Actuator Limits in Bifurcation Control with Applications to Active Control of Fluid Instabilities in Turbomachinery + (PhD Dissertation)
- Robotic Manipulation with Flexible Link Fingers + (PhD Dissertation)
- Robotic Control and Nonholonomic Motion Planning + (PhD Dissertation)
- Real-time trajectory generation for constrained nonlinear dynamical systems using non-uniform rational B-spline basis functions + (PhD dissertation)
- Synthetic logic circuits using RNA aptamer against T7 RNA polymerase + (Preprint)
- Population diversification in a yeast metabolic program promotes anticipation of environmental shifts + (Preprint)
- Bootstrapping bilinear models of robotic sensorimotor cascades + (Preprint)
- TuLiP: A Software Toolbox for Receding Horizon Temporal Logic Planning + (Preprint)
- Quantification and Minimization of Crosstalk Sensitivity in Networks + (Preprint)
- Distributed Synthesis of Control Protocols for Smart Camera Networks + (Preprint)
- Decentralized Multi-Agent Optimization via Dual Decomposition + (Preprint)
- Stability and Performance of Non-Homogeneous Multi-Agent Systems on a Graph + (Preprint)
- Dynamics and Stability of Low Reynolds Number Swimming Near a Wall + (Preprint)
- Networks with the Smallest Average Distance and the Largest Average Clustering + (Preprint)
- Resource optimisation in a wireless sensor network with guaranteed estimator performance + (Preprint)
- Delay-Based Controller Design for Continuous-Time and Hybrid Applications + (Preprint)
- Receding Horizon Temporal Logic Planning + (Preprint)
- Tuning a synthetic in vitro oscillator using control-theoretic tools + (Preprint)
- Synthesis of Embedded Control Systems with High Sampling Frequencies + (Preprint)
- A bio-plausible design for visual pose stabilization + (Preprint)
- Automatic Synthesis of Robust Embedded Control Software + (Preprint)
- Autonomous Driving in Urban Environments: Approaches, Lessons and Challenges + (Preprint)
- Receding Horizon Control for Temporal Logic Specifications + (Preprint)
- Experimental Demonstration of the Dynamics and Stability of a Low Reynolds Number Swimmer Near a Plane Wall + (Preprint)
- Limits on the network sensitivity function for multi-agent systems on a graph + (Preprint)
- Simple Delay-Based Implementation of Continuous-Time Controllers + (Preprint)
- Controlling biological networks by time-delayed signals + (Preprint)
- A bootstrappable bio-plausible design for visual pose stabilization + (Preprint)
- Flight dynamics and control of evasive maneuvers: the fruit fly's takeoff + (Preprint)
- Quantized Consensus via Adaptive Stochastic Gossip Algorithm + (Preprint)
- A bio-plausible design for visual attitude stabilization + (Preprint)
- Receding Horizon Temporal Logic Planning for Dynamical Systems + (Preprint)
- Geometric Control of Particle Manipulation in a Two-Dimensional Fluid + (Preprint)
- Design of insulating devices for in vitro synthetic circuits + (Preprint)
- Compositional stability analysis based on dual decomposition + (Preprint)
- Automatic Conversion Software for the Safety Verification of Goal-Based Control Programs + (Preprint)
- Probabilistic Safety Analysis of Sensor-Driven Hybrid Automata + (Preprint)
- On Quantized Consensus by Means of Gossip Algorithm -- Part II: Convergence Time + (Preprint)
- On Quantized Consensus by Means of Gossip Algorithm -- Part I: Convergence Proof + (Preprint)
- Real-valued average consensus over noisy quantized channels + (Preprint)
- Control Program Verification for a Sample Titan Aerobot Mission + (Preprint)
- Optimal Sensor Hop Selection: Sensor Energy Minimization and Network Lifetime Maximization with Guaranteed System Performance + (Preprint)