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List of results

• The Effect of Compositional Context on Synthetic Gene Networks  + (Enoch Yeung)
• Cascade Discrete-Continuous State Estimators for a Class of Monotone Systems  + (Domitilla Del Vecchio and Richard M. Murray)
• Observability and Local Observer Construction for Unknown Parameters in Linearly and Nonlinearly Parameterized Systems  + (Domitilla Del Vecchio and Richard M. Murray)
• Discrete State Estimators for a Class of Nondeterministic Hybrid Systems on a Lattice  + (Domitilla Del Vecchio and Richard M. Murray)
• Observers for a Class of Hybrid Systems on a Lattice  + (Domitilla Del Vecchio and Richard M. Murray)
• Observability of a Class of Hybrid Systems on Bounded Lattices  + (Domitilla Del Vecchio and Richard M. Murray)
• Discrete State Estimators for Systems on a Lattice  + (Domitilla Del Vecchio, Richard M. Murray, Erik Klavins)
• Classification of Human Motion into Dynamics Based Primitives with Application to Drawing Tasks  + (Domitilla Del Vecchio, Richard M. Murray, Pietro Perona)
• Primitives for Human Motion: A Dynamical Approach  + (Domitilla Del Vecchio, Richard M. Murray, Pietro Perona)
• Segmentation of Human Motion into Dynamics Based Primitives with Application to Drawing Tasks  + (Domitilla Del Vecchio, Richard M. Murray, Pietro Perona)
• Existence of Cascade Discrete-Continuous State Estimators for Systems on a Partial Order  + (Domtilla Del Vecchio and Richard M. Murray)
• Active Control of Integrated Inlet/Compression Systems: Initial Results  + (Douglas G. Macmartin, Ashish Verma, Richard M. Murray, James D. Paduano)
• Synthesis of Distributed Longitudinal Control 1 Protocols for a Platoon of Autonomous Vehicles  + (Duo Han, Yilin Mo, Richard M. Murray)
• Engineering Transcriptional Regulator Effector Specificity Using Computational Design and In Vitro Rapid Prototyping: Developing a Vanillin Sensor  + (E. L. de los Santos)
• A Field-Deployable Arsenic Sensor Integrating Bacillus Megaterium with CMOS Technology  + (Chelsea Y Hu)
• Metabolic engineering of Pseudomonas putida for production of vanillylamine from lignin-derived substrates  + (João Heitor Colombelli Manfrão-Netto)
• Construction of an inducible amyloid expression circuit in Bacillus megaterium: A case study with CsgA and TasA  + (Elin M. Larsson)
• Development of cell-free transcription-translation systems in three soil Pseudomonads  + (Joseph T. Meyerowitz)
• Engineering the soil bacterium Pseudomonas synxantha 2-79 into a ratiometric bioreporter for phosphorus limitation  + (Elin M. Larsson)
• An analytical approach to bistable biological circuit discrimination using real algebraic geometry  + (Dan Siegal-Gaskins)
• Bistable State Switch Enables Ultrasensitive Feedback Control in Heterogeneous Microbial Populations  + (Xinying Ren)
• Design of insulating devices for in vitro synthetic circuits  + (Elisa Franco, Domitilla Del Del Vecchio, Richard M Murray)
• Timing molecular motion and production with a synthetic transcriptional clock  + (Elisa Franco, Eike Friedrichs, Jongmin Kim, Ralf Jungmann, Richard Murray, Erik Winfree, Friedrich C. Simmel)
• Negative autoregulation matches production and demand in synthetic transcriptional networks  + (Elisa Franco, Giulia Giordano, Per-Ola Forsberg, Richard M. Murray)
• Design and performance of in vitro transcription rate regulatory circuit  + (Elisa Franco, Richard M Murray)

• Quantitative characterization of random partitioning in the evolution of plasmid-encoded traits  + (Emanuel Flores-Bautista)

• Design and Implementation of a Biomolecular Circuit for Tracking Protein Concentration  + (Emmanuel L. C. de los Santos*, Victoria Hsiao* and Richard M. Murray)
• Engineering Transcriptional Regulator Effector Specificity Through Rational Design and Rapid Prototyping  + (Emmanuel L.C. de los Santos, Joseph T. Meyerowitz, Stephen L. Mayo, and Richard M. Murray)
• Engineering Transcriptional Regulator Effector Specificity using Computational Design and In Vitro Rapid Prototyping: Developing a Vanillin Sensor  + (Emmanuel Lorenzo Cornejo de los Santos, Joseph T Meyerowitz, Stephen L Mayo, Richard M Murray)
• Biophysical Constraints Arising from Compositional Context in Synthetic Gene Networks  + (Enoch Yeung)
• Data-driven network models for genetic circuits from time-series data with incomplete measurements  + (Enoch Yeung)
• The Effect of Compositional Context on Synthetic Gene Networks  + (Enoch Yeung)
• Modeling the Effects of Compositional Context on Promoter Activity in an E. Coli Extract based Transcription-Translation System  + (Enoch Yeung, Andrew Ng, Jongmin Kim, Zachary Z. Sun, and Richard M. Murray)
• Modeling Environmental Disturbances with the Chemical Master Equation  + (Enoch Yeung, James L. Beck, and Richard M. Murray)
• Global Dynamical Structure Reconstruction from Reconstructed Dynamical Structure Subnetworks: Applications to Biochemical Reaction Networks  + (Enoch Yeung, Jongmin Kim, Jorge Gonc ̧alves, and Richard M. Murray)
• Resource Competition as a Source of Non-Minimum Phase Behavior in Transcription-Translation Systems  + (Enoch Yeung, Jongmin Kim, Richard M. Murray)
• Quantifying Crosstalk in Biochemical Systems  + (Enoch Yeung, Jongmin Kim, Ye Yuan, Jorge Goncalves and Richard M. Murray)
• System identification of phosophorylation based insulator in a cell-free in vitro transcription-translation system  + (Enoch Yeung, Shaobin Guo, Richard M. Murray)
• Distributed Computation for Cooperative Control  + (Eric Klavins and Richard M. Murray)
• Optimal Control of Nonlinear Systems with Temporal Logic Specifications  + (Eric M. Wolff and Richard M. Murray)
• Optimal Control with Weighted Average Costs and Temporal Logic Specifications  + (Eric M. Wolff, Ufuk Topcu and Richard M. Murray)
• Robust Control of Uncertain Markov Decision Processes with Temporal Logic Specifications  + (Eric M. Wolff, Ufuk Topcu and Richard M. Murray)
• Automaton-Guided Controller Synthesis for Nonlinear Systems with Temporal Logic  + (Eric M. Wolff, Ufuk Topcu, and Richard M. Murray)
• Efficient reactive controller synthesis for a fragment of linear temporal logic  + (Eric M. Wolff, Ufuk Topcu, and Richard M. Murray)
• Optimization-based Control of Nonlinear Systems with Linear Temporal Logic Specifications  + (Eric M. Wolff, Ufuk Topcu, and Richard M. Murray)
• Optimal Control of Non-deterministic Systems for a Computationally Efficient Fragment of Temporal Logic  + (Eric M. Wolff, Ufuk Topcu, and Richard M. Murray)
• Synthesizing Reactive Test Environments for Autonomous Systems: Testing Reach-Avoid Specifications with Multi-Commodity Flows  + (Apurva Badithela)
• Flow-Based Synthesis of Reactive Tests for Discrete Decision-Making Systems with Temporal Logic Specifications  + (Josefine B. Graebener)
• Robust Safe Control Synthesis with Disturbance Observer-Based Control Barrier Functions  + (Ersin Das)
• Hard Limits And Performance Tradeoffs In A Class Of Sequestration Feedback Systems  + (Noah Olsman)
• A geometric and structural approach to the analysis and design of biological circuit dynamics: a theory tailored for synthetic biology  + (John P. Marken)