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• Differentially Flat Nonlinear Control Systems  + (PhD Dissertation, Caltech, May 1997)
• Nonlinear Control and Modeling of Rotating Stall in an Axial Flow Compressor  + (PhD Dissertation, Caltech, Sep 1996)
• Distributed Gradient Systems and Dynamic Coordination  + (PhD Dissertation, Control and Dynamical Systems)
• Bio-Inspired Visuomotor Convergence in Navigation and Flight Control Systems  + (PhD Dissertation, Control and Dynamical Systems)
• State Estimation in Multi-Agent Decision and Control Systems  + (PhD Dissertation, Control and Dynamical Systems)
• Real-Time Optimal Trajectory Generation for Constrained Dynamical Systems  + (PhD Dissertation, Control and Dynamical Systems)
• Managing information in networked and multi-agent control systems  + (PhD Dissertation, Mechanical Engineering)
• System architectures and environment modeling for high-speed autonomous navigation  + (PhD Dissertation, Mechanical Engineering)
• Robotic Control and Nonholonomic Motion Planning  + (PhD Dissertation, UC Berkeley, Dec 1990)
• Real-time trajectory generation for constrained nonlinear dynamical systems using non-uniform rational B-spline basis functions  + (PhD dissertation, Control and Dynamical Systems, Nov 2007)

• Autonomous Driving in Urban Environments: Approaches, Lessons and Challenges  + (Philosophical Transactions of the Royal Society - A, 2009 (Submitted))
• Controlling biological networks by time-delayed signals  + (Philosophical Transactions of the Royal Society - A, 2009 (Submitted))
• Dynamics and stability of a class of low Reynolds number swimmers near a wall  + (Physical Review E, 19(4))
• Engineering Transcriptional Regulator Effector Specificity Through Rational Design and Rapid Prototyping  + (Presented at Synthetic Biology: Engineering, Evolution and Design (SEED), 14-18 July 2014)
• Prototyping 1,4-butanediol (BDO) biosynthesis pathway in a cell-free transcription-translation (TX-TL) system  + (Presented at Synthetic Biology: Engineering, Evolution and Design (SEED), 10-13 June 2015)
• Design of a Toolbox of RNA Thermometers  + (Presented at Synthetic Biology: Engineering, Evolution and Design (SEED), 10-13 June 2015)
• Design and Implementation of a Biomolecular Circuit for Tracking Protein Concentration  + (Presented, 2013 American Control Conference (ACC))
• Characterization of minimum inducer separation time for a two-input integrase-based event detector  + (Presented, 2015 Winter q-bio Conference (5 Nov 2014))
• Rapid in vitro engineering of 16 two-input logic gates  + (Presented, 2016 Winter q-Bio)
• Use of population-level cell-state switching for recording transient inducer pulses  + (Presented, 2016 Winter q-Bio (5 Nov 2015))