Difference between revisions of "SURF 2017"

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# A list of SURF project descriptions is given in the table below.  Due to the number of SURF projects that we support, we are only able to support students who select from among these projects.  Please make sure to read the project descriptions, required skills (if any)  and skim a few of the listed references before contacting me about doing a SURF project.   
# A list of SURF project descriptions is given in the table below.  Due to the number of SURF projects that we support, we are only able to support students who select from among these projects.  Please make sure to read the project descriptions, required skills (if any)  and skim a few of the listed references before contacting me about doing a SURF project.   
# Students interested in writing proposals for SURF projects should contact me via e-mail by 9 Jan (Fri) and provide the following information:
# Students interested in writing proposals for SURF projects should contact me via e-mail by 11 Jan (Wed) and provide the following information:
#* A list of up to three SURF projects from the list below that you are interested in working on
#* A list of up to three SURF projects from the list below that you are interested in working on
#* A one page resume listing relevant experience and coursework
#* A one page resume listing relevant experience and coursework
#* If you are not a Caltech student, I will also need the following additional information:
#* If you are not a Caltech student, I will also need the following additional information:
#** An unofficial copy of your academic transcript
#** An unofficial copy of your academic transcript
#** Names of two faculty members at your current institution that I can contact for a reference
#** Names of two faculty members at your current institution that I can contact for a reference  
# Starting on 10 January, I will go through all applications and work with my group to identify who is a possible fit for each project.  We will then contact you and ask for you to meet (or talk with) possible co-mentors so that we can eventually work out who we will work with in writing up a proposal.
# Starting on 12 January, I will go through all applications and work with my group to identify who is a possible fit for each project.  We will then contact you and ask for you to meet (or talk with) possible co-mentors so that we can eventually work out who we will work with in writing up a proposal.
# We hope to make final decisions on projects by about 20 Jan, at which point we will start working with students on writing up proposals.
# We hope to make final decisions on projects by about 20 Jan, at which point we will start working with students on writing up proposals.
# All applications should go through the normal SURF application process, described at www.surf.caltech.edu.  SURF applications are due on ~21 Feb 2015.
# All applications should go through the normal SURF application process, described at www.surf.caltech.edu.  SURF applications are due on ~22 Feb 2015 (Amgen applications are due a week earlier)..
# If you are selected for a SURF, please be aware of the following information
# If you are selected for a SURF, please be aware of the following information
#* All SURF projects in my group will start on 16 Jun (Tue).  If you can't start on that date, please make sure that you indicate this when you contact me
#* All SURF projects in my group will start on 20 Jun (Tue).  If you can't start on that date, please make sure that you indicate this when you contact me
#* All SURF projects are for a minimum of 10 weeks, although I usually recommend that you try to stay for 12 weeks if possible (at no additional pay).  It's hard to complete a project in just 10 weeks and spending a few extra weeks can greatly improve the project.
#* All SURF projects are for a minimum of 10 weeks, although I usually recommend that you try to stay for 12 weeks if possible (at no additional pay).  It's hard to complete a project in just 10 weeks and spending a few extra weeks can greatly improve the project.
#* All SURF students in my group will be expected to devote full-time effort to their SURF project, so you cannot have a second job in addition to your SURF.
#* All SURF students in my group will be expected to devote full-time effort to their SURF project, so you cannot have a second job in addition to your SURF.
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| '''Title''' || '''Grant/Project''' || '''Co-Mentors''' || '''Comments'''
| '''Title''' || '''Grant/Project''' || '''Co-Mentors''' || '''Comments'''
|-
|-
| {{SURF entry|2017|Mapping Differences in Gene Expresion in Linear and Plasmid DNA in a Cell-Free Expression (TXTL) System }}  
| {{SURF entry|2017|Scalable Robust Synthesis from Temporal Logic Specifications}}  
| Keywords: in vitro synthetic biology, nonlinear modeling, model prediction and validation
| [[SRC TerraSwarm]]
| [https://www.cds.caltech.edu/~eyeung/ Enoch Yeung]
| Sumanth Dathathri
| Multiple projects may be available
|-
|-
|{{SURF entry|2017|Scalable Robust Synthesis from Temporal Logic Specifications}}  
| {{SURF entry|2017|Data-driven models for temporal logic control}}
| Keywords: Formal Methods, Robust Synthesis, Reinforcement Learning, Algorithms, Robotics
| [[SRC TerraSwarm]]
| [https://www.cds.caltech.edu/~eyeung/ Sumanth Dathathri]
| Sofie Haestaert
|
|-
| {{SURF entry|2017|Synthesizing flight software (FSW) discrete controllers from formal specifications}}
| [[JPL CIF17]]
| TBD
|
|-
| {{SURF|2017|Integrase based circuits for sequential and temporal control of gene expression }}
| [[ARO ICB]]
| Rory Williams
|
|-
| {{SURF|2017|Synthetic modules for control of bacterial growth}}
| [[DARPA BioCon]]
| Reed McCardell
|
|-
| {{SURF|2017|Length and time scales of cell-cell signalling circuits in agar}}
| [[ARO ICB]]
| James Parkin
|
|-
|  {{SURF|2017|Genetically-Programmed Artificial Cells and Multi-Cellular Machines}}
| [[GBMF PMTI]], [[NSF MPP]]
| TBD
| Multiple projects may be available
|}
|}

Latest revision as of 16:38, 11 January 2017

This page is intended for students interested in working on SURF projects in the Summer of 2015. It contains information about how to apply for a SURF project in my group along with a list of project areas.

Applying for a SURF project

Because I get many students interested in doing SURFs in my group and because we have several projects available, we use the first few weeks in January to sort out who we will work with in writing proposals. We only submit one proposal per project area and so we often can't accommodate everyone who wants to work in my group over the summer.

  1. A list of SURF project descriptions is given in the table below. Due to the number of SURF projects that we support, we are only able to support students who select from among these projects. Please make sure to read the project descriptions, required skills (if any) and skim a few of the listed references before contacting me about doing a SURF project.
  2. Students interested in writing proposals for SURF projects should contact me via e-mail by 11 Jan (Wed) and provide the following information:
    • A list of up to three SURF projects from the list below that you are interested in working on
    • A one page resume listing relevant experience and coursework
    • If you are not a Caltech student, I will also need the following additional information:
      • An unofficial copy of your academic transcript
      • Names of two faculty members at your current institution that I can contact for a reference
  3. Starting on 12 January, I will go through all applications and work with my group to identify who is a possible fit for each project. We will then contact you and ask for you to meet (or talk with) possible co-mentors so that we can eventually work out who we will work with in writing up a proposal.
  4. We hope to make final decisions on projects by about 20 Jan, at which point we will start working with students on writing up proposals.
  5. All applications should go through the normal SURF application process, described at www.surf.caltech.edu. SURF applications are due on ~22 Feb 2015 (Amgen applications are due a week earlier)..
  6. If you are selected for a SURF, please be aware of the following information
    • All SURF projects in my group will start on 20 Jun (Tue). If you can't start on that date, please make sure that you indicate this when you contact me
    • All SURF projects are for a minimum of 10 weeks, although I usually recommend that you try to stay for 12 weeks if possible (at no additional pay). It's hard to complete a project in just 10 weeks and spending a few extra weeks can greatly improve the project.
    • All SURF students in my group will be expected to devote full-time effort to their SURF project, so you cannot have a second job in addition to your SURF.

List of available projects

Projects will be posted as they come available. I recommend waiting until near the deadline submission before submitting your project preferences.

Title Grant/Project Co-Mentors Comments
Scalable Robust Synthesis from Temporal Logic Specifications SRC TerraSwarm Sumanth Dathathri Multiple projects may be available
Data-driven models for temporal logic control SRC TerraSwarm Sofie Haestaert
Synthesizing flight software (FSW) discrete controllers from formal specifications JPL CIF17 TBD
Integrase based circuits for sequential and temporal control of gene expression ARO ICB Rory Williams
Synthetic modules for control of bacterial growth DARPA BioCon Reed McCardell
Length and time scales of cell-cell signalling circuits in agar ARO ICB James Parkin
Genetically-Programmed Artificial Cells and Multi-Cellular Machines GBMF PMTI, NSF MPP TBD Multiple projects may be available