https://murray.cds.caltech.edu/index.php?action=history&feed=atom&title=Yeast_pheromone_pathway 2026-09-11T12:52:05Z Revision history for this page on the wiki MediaWiki 1.44.2 https://murray.cds.caltech.edu/index.php?title=Yeast_pheromone_pathway&diff=9683&oldid=prev 2009-08-21T02:33:51Z

<p></p> <table style="background-color: #fff; color: #202122;" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 02:33, 21 August 2009</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l9">Line 9:</td> <td colspan="2" class="diff-lineno">Line 9:</td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># B. Kofahl and E. Klipp, &quot;Modeling the dynamics of the yeast pheromone pathway&quot;.  &#039;&#039;Yeast&#039;&#039;, 21:831-850, 2004.</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># B. Kofahl and E. Klipp, &quot;Modeling the dynamics of the yeast pheromone pathway&quot;.  &#039;&#039;Yeast&#039;&#039;, 21:831-850, 2004.</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># L. Bardwel, &quot;A walk-through of the yeast mating pheromone response pathway&quot;. &#039;&#039;Peptides&#039;&#039;, 26:339-350, 2005.</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># L. Bardwel, &quot;A walk-through of the yeast mating pheromone response pathway&quot;. &#039;&#039;Peptides&#039;&#039;, 26:339-350, 2005.</div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">[[Image:yeast-pathway.png]]</ins></div></td></tr> <!-- diff cache key acs_math_mw_144-murraycds_:diff:1.41:old-9677:rev-9683:php=table --> </table>

Murray https://murray.cds.caltech.edu/index.php?title=Yeast_pheromone_pathway&diff=9677&oldid=prev 2009-08-03T23:24:29Z

<p></p> <table style="background-color: #fff; color: #202122;" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 23:24, 3 August 2009</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l3">Line 3:</td> <td colspan="2" class="diff-lineno">Line 3:</td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=== Computational models ===</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=== Computational models ===</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* Biomodels.net: Kofahl and Klipp, &#039;&#039;Modelling the dynamics of the yeast pheromone pathway&#039;&#039;</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* Biomodels.net: Kofahl and Klipp, &#039;&#039;Modelling the dynamics of the yeast pheromone pathway&#039;&#039;</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>**  [http://biomodels.caltech.edu/BIOMD0000000032 Yeast pheromone pathway]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>**  [http://biomodels.caltech.edu/BIOMD0000000032 Yeast pheromone pathway] <ins style="font-weight: bold; text-decoration: none;">(main page)</ins></div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>** [http://www.ebi.ac.uk/biomodels-main/static-pages.do?page=ModelMonth%252FJanuary2008%252FBIOMD0000000032_MM Model overview<del style="font-weight: bold; text-decoration: none;">]</del></div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>** [http://www.ebi.ac.uk/biomodels-main/static-pages.do?page=ModelMonth%252FJanuary2008%252FBIOMD0000000032_MM Model <ins style="font-weight: bold; text-decoration: none;">of the month] (</ins>overview<ins style="font-weight: bold; text-decoration: none;">)</ins></div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=== References ===</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=== References ===</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># B. Kofahl and E. Klipp, &quot;Modeling the dynamics of the yeast pheromone pathway&quot;.  &#039;&#039;Yeast&#039;&#039;, 21:831-850, 2004.</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># B. Kofahl and E. Klipp, &quot;Modeling the dynamics of the yeast pheromone pathway&quot;.  &#039;&#039;Yeast&#039;&#039;, 21:831-850, 2004.</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># L. Bardwel, &quot;A walk-through of the yeast mating pheromone response pathway&quot;. &#039;&#039;Peptides&#039;&#039;, 26:339-350, 2005.</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># L. Bardwel, &quot;A walk-through of the yeast mating pheromone response pathway&quot;. &#039;&#039;Peptides&#039;&#039;, 26:339-350, 2005.</div></td></tr> <!-- diff cache key acs_math_mw_144-murraycds_:diff:1.41:old-9676:rev-9677:php=table --> </table>

Murray https://murray.cds.caltech.edu/index.php?title=Yeast_pheromone_pathway&diff=9676&oldid=prev 2009-08-03T23:23:34Z

<p><span class="autocomment">References =</span></p> <table style="background-color: #fff; color: #202122;" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 23:23, 3 August 2009</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l6">Line 6:</td> <td colspan="2" class="diff-lineno">Line 6:</td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>** [http://www.ebi.ac.uk/biomodels-main/static-pages.do?page=ModelMonth%252FJanuary2008%252FBIOMD0000000032_MM Model overview]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>** [http://www.ebi.ac.uk/biomodels-main/static-pages.do?page=ModelMonth%252FJanuary2008%252FBIOMD0000000032_MM Model overview]</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>=== References <del style="font-weight: bold; text-decoration: none;">=</del>===</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>=== References ===</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div># B. Kofahl and E. Klipp, "Modeling the dynamics of the <del style="font-weight: bold; text-decoration: none;">yeaster </del>pheromone pathway".  ''Yeast'', 21:831-850, 2004.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div># B. Kofahl and E. Klipp, "Modeling the dynamics of the <ins style="font-weight: bold; text-decoration: none;">yeast </ins>pheromone pathway".  ''Yeast'', 21:831-850, 2004.</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># L. Bardwel, &quot;A walk-through of the yeast mating pheromone response pathway&quot;. &#039;&#039;Peptides&#039;&#039;, 26:339-350, 2005.</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># L. Bardwel, &quot;A walk-through of the yeast mating pheromone response pathway&quot;. &#039;&#039;Peptides&#039;&#039;, 26:339-350, 2005.</div></td></tr> <!-- diff cache key acs_math_mw_144-murraycds_:diff:1.41:old-9675:rev-9676:php=table --> </table>

Murray https://murray.cds.caltech.edu/index.php?title=Yeast_pheromone_pathway&diff=9675&oldid=prev 2009-08-03T23:23:19Z

<p></p> <table style="background-color: #fff; color: #202122;" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 23:23, 3 August 2009</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l3">Line 3:</td> <td colspan="2" class="diff-lineno">Line 3:</td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=== Computational models ===</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=== Computational models ===</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* Biomodels.net: Kofahl and Klipp, &#039;&#039;Modelling the dynamics of the yeast pheromone pathway&#039;&#039;</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* Biomodels.net: Kofahl and Klipp, &#039;&#039;Modelling the dynamics of the yeast pheromone pathway&#039;&#039;</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>**  <del style="font-weight: bold; text-decoration: none;">[</del>[http://biomodels.caltech.edu/BIOMD0000000032 Yeast pheromone pathway<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>**  [http://biomodels.caltech.edu/BIOMD0000000032 Yeast pheromone pathway]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>** <del style="font-weight: bold; text-decoration: none;">[</del>[http://www.ebi.ac.uk/biomodels-main/static-pages.do?page=ModelMonth%252FJanuary2008%252FBIOMD0000000032_MM Model overview<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>** [http://www.ebi.ac.uk/biomodels-main/static-pages.do?page=ModelMonth%252FJanuary2008%252FBIOMD0000000032_MM Model overview]</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=== References ====</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=== References ====</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># B. Kofahl and E. Klipp, &quot;Modeling the dynamics of the yeaster pheromone pathway&quot;.  &#039;&#039;Yeast&#039;&#039;, 21:831-850, 2004.</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># B. Kofahl and E. Klipp, &quot;Modeling the dynamics of the yeaster pheromone pathway&quot;.  &#039;&#039;Yeast&#039;&#039;, 21:831-850, 2004.</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># L. Bardwel, &quot;A walk-through of the yeast mating pheromone response pathway&quot;. &#039;&#039;Peptides&#039;&#039;, 26:339-350, 2005.</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># L. Bardwel, &quot;A walk-through of the yeast mating pheromone response pathway&quot;. &#039;&#039;Peptides&#039;&#039;, 26:339-350, 2005.</div></td></tr> <!-- diff cache key acs_math_mw_144-murraycds_:diff:1.41:old-9674:rev-9675:php=table --> </table>

Murray https://murray.cds.caltech.edu/index.php?title=Yeast_pheromone_pathway&diff=9674&oldid=prev 2009-08-03T23:23:05Z

<p></p> <p><b>New page</b></p><div>This page collects some information on the yeast pheromone pathway, which I am considering as a possible example of a biomolecular circuit.<br /> <br /> === Computational models ===<br /> * Biomodels.net: Kofahl and Klipp, &#039;&#039;Modelling the dynamics of the yeast pheromone pathway&#039;&#039;<br /> ** [[http://biomodels.caltech.edu/BIOMD0000000032 Yeast pheromone pathway]]<br /> ** [[http://www.ebi.ac.uk/biomodels-main/static-pages.do?page=ModelMonth%252FJanuary2008%252FBIOMD0000000032_MM Model overview]]<br /> <br /> === References ====<br /> # B. Kofahl and E. Klipp, &quot;Modeling the dynamics of the yeaster pheromone pathway&quot;. &#039;&#039;Yeast&#039;&#039;, 21:831-850, 2004.<br /> # L. Bardwel, &quot;A walk-through of the yeast mating pheromone response pathway&quot;. &#039;&#039;Peptides&#039;&#039;, 26:339-350, 2005.</div>

Murray