Murray Wiki - User contributions [en]

Group Schedule, Winter 2020

2020-01-02T19:29:33Z

Rmccarde: /* Week 7: 17-21 Feb */

Group Schedule, Winter 2020

2020-01-02T19:29:22Z

Rmccarde: /* Week 4: 27-31 Jan */

SURF 2019: Synthetic modules for regulation of bacterial growth

2019-01-15T00:19:52Z

Rmccarde: Created page with "'''2019 SURF project description''' * Mentor: Richard Murray * Co-mentor: Reed McCardell Complex consortia of microbes occur nearly everywhere in nature, includ..."

'''[[SURF 2019|2019 SURF]] project description'''
* Mentor: Richard Murray
* Co-mentor: Reed McCardell

Complex consortia of microbes occur nearly everywhere in nature, including in the human body, and are implicated in a number of significant environmental and human physiological processes. The composition of microbial communities all over the human body are dynamic in response to changes in the environment around the human host and inside the host itself. In an attempt to build understanding and control of the dynamics of microbial community composition, we are working to design communities with various population level behaviors effected by synthetic regulators of bacterial growth.

The approach we are taking to this goal involves cell-cell communication between bacteria in culture, genetic circuits that translate population information into signals inside each cell and synthetic growth regulators activated or repressed by these intracellular signals. Together, modules performing each of these functions can create a community of bacteria capable of regulating its composition by slowing or speeding up growth of community members.

At the moment, toxin/antitoxin systems, particularly ccdB/ccdA, are the most well-used growth regulators [1,2], but the set of regulators in the syntheic biological toolbox is growing. One important focus of our project to develop synthetic microbial consortia is the development of a collection of growth regulatory systems acting with different mechanisms, dynamic range and effect sizes. We envision using these regulators in combination or individually to enable various population level dynamics in bacterial communities.

Of particular interest are a class of antibiotics that are very relevant to our understanding and control of '''natural''' microbial communities; the secreted antibiotics, or bacteriocins, are peptide antibiotics produced by nearly every species of bacteria that have frequently narrow-spectrum effects on bacteria of similar species. Bacteriocins are employed widely in natural microbial communities, have seen at least introductory quantitative study [3,4,5], and offer improved simplicity, efficiency and power over other growth regulators, as they are capable of both signal transmission (as an intercellular signal) and growth regulatory action as a single genetic module (compared to widely used quorum sensing modules coupled with effectors)

This SURF project will investigate one of these mechanisms of growth regulation with goals:
* '''High level goal:''' Design and construct a genetic circuit effecting composition control on a synthetic community of bacteria. With subgoals below...
* ''Clone at least one effector and all its required component parts (bacteriocin, resistance gene, release proteins etc.)''
* ''Assess dynamic range, effect size off/on dynamics of growth regulator(s)''
* ''Develop a mathematical model for the action of growth regulator(s)''

The specific growth regulatory system presented above are ideas from the mentor and co-mentor, but we are open to mechanisms of growth regulation of all types. Students are encouraged to consider growth regulation at any level and investigate systems in which they are interested.

'''Required skills:''' Students should be comfortable with basic molecular biological techniques for cloning of genes and bacterial transformation. The work will be performed in ''E. coli'' and students should be familiar with bacterial culture. Quantification of growth regulatory parameters is very important for efforts to computationally model growth regulation and skills in programming and data analysis are required. Modeling of growth regulation will be based on differential equations; students should be familiar with the basic mathematics of differential equations.

References
# You, L., Cox, R. S., Weiss, R. & Arnold, F. H. Programmed population control by cell–cell communication and regulated killing. Nature 428, 868–871 (2004).
# Balagaddé, F. K. et al. A synthetic Escherichia coli predator-prey ecosystem. Mol. Syst. Biol. 4, 187 (2008).
# Weber, M. F., Poxleitner, G., Hebisch, E., Frey, E. & Opitz, M. Chemical warfare and survival strategies in bacterial range expansions. J. R. Soc. Interface 11, 20140172 (2014).
# Kirkup, B. C. & Riley, M. A. Antibiotic-mediated antagonism leads to a bacterial game of rock–paper–scissors in vivo. Nature 428, 412–414 (2004).
# Kerr, B., Riley, M. A., Feldman, M. W. & Bohannan, B. J. M. Local dispersal promotes biodiversity in a real-life game of rock–paper–scissors. Nature 418, 171–174 (2002).

SURF discussions, Jan 2018

2018-01-22T19:21:40Z

Rmccarde: /* 24 Jan (Wed) */

Slots for talking with applicants and co-mentors about SURF projects. Please sign up for one of the slots below. All times are PST. __NOTOC__

In preparation for our conversation, please do the following:
* SURF students should work with their co-mentors to find a time the meeting/Skype call. (For Skype calls, co-mentors should initiate.)
* Please make sure you have read the material in the description of your project, so that you are prepared to talk about what the project is about and we can narrow in on the key ideas that will be the basis of your proposal
* Please take a look at the [[SURF GOTChA chart]] page, which is the format that we will use for the first iteration of your project proposal.

{| border=1
|- valign=top
| width=30% |
==== 23 Jan (Tue) ====
* 1:00 pm PST: open
<hr>
* 4:00 pm PST: Andrey/ Sanjana
* 4:30 pm PST: open
<hr>
* 6:00 pm PST: open
* 6:30 pm PST: open
| width=30% |

==== 24 Jan (Wed) ====
* 7:30 am PST: open (hold for India/Europe)
* 8:00 am PST: open (hold for India/Europe)
<hr>
*12:15 pm PST: Filip
*12:45 pm PST: open (if needed)
<hr>
* 4:30 pm PST: Reed / Leah
* 5:00 pm PST: open
* 5:30 pm PST: open
|}

The agenda for the phone call is (roughly):

# Description of the basic idea behind the project (based on applicant's understanding)
# Discussion about approaches, things to read, variations to consider, etc
# Discussion of the format of the proposal
# Questions and discussion about the process

SURF 2018: Synthetic modules for regulation of bacterial growth

2017-12-16T00:15:10Z

Rmccarde: Created page with "'''2018 SURF project description''' * Mentor: Richard Murray * Co-mentor: Reed McCardell Complex consortia of microbes occur nearly everywhere in nature, includ..."

'''[[SURF 2018|2018 SURF]] project description'''
* Mentor: Richard Murray
* Co-mentor: Reed McCardell

Complex consortia of microbes occur nearly everywhere in nature, including in the human body, and are implicated in a number of significant environmental and human physiological processes. The composition of microbial communities all over the human body are dynamic in response to changes in the environment around the human host and inside the host itself. In an attempt to build understanding and control of the dynamics of microbial community composition, we are working to design communities with various population level behaviors effected by synthetic regulators of bacterial growth.

The approach we are taking to this goal involves cell-cell communication between bacteria in culture, genetic circuits that translate population information into signals inside each cell and synthetic growth regulators activated or repressed by these intracellular signals. Together, modules performing each of these functions can create a community of bacteria capable of regulating its composition by slowing or speeding up growth of community members.

At the moment, toxin/antitoxin systems, particularly ccdB/ccdA, are the most well-used growth regulators [1,2], but the set of regulators in the syntheic biological toolbox is growing. One important focus of our project to develop synthetic microbial consortia is the development of a collection of growth regulatory systems acting with different mechanisms, dynamic range and effect sizes. We envision using these regulators in combination or individually to enable various population level dynamics in bacterial communities.

Of particular interest are two types of growth regulation that are very relevant to our understanding and control of '''natural''' microbial communities. One is regulation via secreted antibiotics, or bacteriocins, and the other is regulation via metabolic interdependency and resource availability. Both these systems are employed widely in natural microbial communities, have seen at least introductory quantitative study [3,4,5,6], and offer improved simplicity, efficiency and power over other growth regulators, as they are capable of both signal transmission (as an intercellular signal) and growth regulatory action as a single genetic module (compared to widely used quorum sensing modules coupled with effectors)

This SURF project will investigate one of these mechanisms of growth regulation with goals:
* '''High level goal:''' Design and construct a genetic circuit effecting composition control on a synthetic community of bacteria. With subgoals below...
* ''Clone at least one effector and all its required component parts (bacteriocin +/- resistance gene; metabolic enzyme inhibitor/activator)''
* ''Assess dynamic range, effect size off/on dynamics of growth regulator(s)''
* ''Develop a mathematical model for the action of growth regulator(s)''

The specific growth regulatory systems presented above are ideas from the mentor and co-mentor, but we are open to mechanisms of growth regulation of all types. Students are encouraged to consider growth regulation at any level and investigate systems in which they are interested.

'''Required skills:''' Students should be comfortable with basic molecular biological techniques for cloning of genes and bacterial transformation. The work will be performed in ''E. coli'' and students should be familiar with bacterial culture. Quantification of growth regulatory parameters is very important for efforts to computationally model growth regulation and skills in programming and data analysis are required. Modeling of growth regulation will be based on differential equations; students should be familiar with the basic mathematics of differential equations.

References
# You, L., Cox, R. S., Weiss, R. & Arnold, F. H. Programmed population control by cell–cell communication and regulated killing. Nature 428, 868–871 (2004).
# Balagaddé, F. K. et al. A synthetic Escherichia coli predator-prey ecosystem. Mol. Syst. Biol. 4, 187 (2008).
# Weber, M. F., Poxleitner, G., Hebisch, E., Frey, E. & Opitz, M. Chemical warfare and survival strategies in bacterial range expansions. J. R. Soc. Interface 11, 20140172 (2014).
# Kirkup, B. C. & Riley, M. A. Antibiotic-mediated antagonism leads to a bacterial game of rock–paper–scissors in vivo. Nature 428, 412–414 (2004).
# Kerr, B., Riley, M. A., Feldman, M. W. & Bohannan, B. J. M. Local dispersal promotes biodiversity in a real-life game of rock–paper–scissors. Nature 418, 171–174 (2002).
# Kerner, A., Park, J., Williams, A. & Lin, X. N. A programmable escherichia coli consortium via tunable symbiosis. PLoS One 7, 1–10 (2012).

SURF 2017: Synthetic modules for control of bacterial growth

2017-12-16T00:14:25Z

Rmccarde:

'''[[SURF 2017|2017 SURF]] project description'''
* Mentor: Richard Murray
* Co-mentor: Reed McCardell

Complex consortia of microbes occur nearly everywhere in nature, including in the human body, and are implicated in a number of significant environmental and human physiological processes. The composition of a microbial community, particularly the resident community in the human GI tract, is dynamic in response to small and large changes in the environment outside and inside the host. In an attempt to build understanding and control of the dynamics of microbial community composition, we are working to design communities with various population level behaviors effected by synthetic controllers of bacterial growth.

The approach we are taking to this goal involves cell-cell communication between bacteria in culture, genetic circuits that translate population information into signals inside each cell and synthetic growth controllers activated or repressed by these intracellular signals. Together, modules performing each of these functions build a community of bacteria capable of reacting to its composition by slowing or speeding up growth of community members.

At the moment, genetic toxin/antitoxin systems, particularly ccdB/ccdA, are the most well-characterized and well-used growth controllers [1,2]. These are few and do not act with much dynamic range or diversity of mechanism. One big focus of our project is the development of a collection of growth control systems acting with different mechanisms, dynamic range and effect sizes. We envision using these controllers in combination or individually to enable various population level dynamics in bacterial communities.

Of particular interest are two types of growth control that are very relevant to our understanding and control of natural microbial communities. One is control via secreted antibiotics, or bacteriocins (which has seen some investigation previously [3]), and the other is control via metabolic interdependency and resource availability. Metabolic population control has been achieved using genetically-modified auxotrophs [4], but we plan to investigate ways around genome modification in favor of plasmid based modules for metabolic control.

This SURF project will investigate one of these mechanisms of growth control with goals:
* Clone at least one effector and all its required component parts (bacteriocin +/- resistance gene; metabolic enzyme inhibitor/activator)
* Assess dynamic range, effect size off/on dynamics of growth controller(s)
* Develop a mathematical model for the action of growth controller(s)
* ''Think about other mechanisms of controlling bacterial growth (described below)''

The specific growth control topics presented above are ideas from the mentor and co-mentor, but we are open to mechanisms of growth control of all types. Students are encouraged to design controllers of their own with their mentors and investigate the parameters of action.

'''Required skills:''' Students should be comfortable with basic molecular biological techniques for cloning of genes and bacterial transformation. The work will be performed in bacteria and students should be familiar with bacterial culture. Quantification of growth control parameters is very important for efforts to computationally model growth control, and skills in programming and data analysis are required. Modeling of growth control will be based on differential equations; students should be familiar with the basics of differential equations mathematics.

References
# You, L., Cox, R. S., Weiss, R. & Arnold, F. H. Programmed population control by cell–cell communication and regulated killing. Nature 428, 868–871 (2004).
# Balagaddé, F. K. et al. A synthetic Escherichia coli predator-prey ecosystem. Mol. Syst. Biol. 4, 187 (2008).
# Weber, M. F., Poxleitner, G., Hebisch, E., Frey, E. & Opitz, M. Chemical warfare and survival strategies in bacterial range expansions. J. R. Soc. Interface 11, 20140172 (2014).
# Kerner, A., Park, J., Williams, A. & Lin, X. N. A programmable escherichia coli consortium via tunable symbiosis. PLoS One 7, 1–10 (2012).

Mary Dunlop, Oct 2017

2017-10-19T19:10:02Z

Rmccarde: /* Friday */

Mary Dunlop will visit Caltech on 19-20 Oct 2017. __NOTOC__

== Topics ==

Richard will organize a set of discussions with Mary on different topics. If you are interested in joining in the discussions, sign up below. You should put your name and any constraints on your time.

{| border=1
|- valign=top
| width=33% |
==== Topic #1: mutational robustness ====
* Richard - available 1-5 pm
* Anandh - 24/7/365
* Rory - 1-5pm (skype)
* Reed - available 1-5pm
* Andy - available 2-5pm
| width=33% |

==== Topic #2: feedback control of biological systems ====
* Richard - available 1-5 pm
* Ania - 1pm - 4pm
* Vipul - available 1-5p
* Reed - available 1-5pm
* Andy - available 2-5pm
* Name - availability
| width=33% |

==== Topic #3: TX-TL (modeling and experiments) ====
* Richard - available 1-5 pm
* William - busy 1-4 pm
* Vipul - available 1-5p
* Name - availability
|}

==== Additional topics ====
* If you have an additional topic you would like to discuss, but it here.

== Schedule ==
To be filled out later.

==== Thursday ====
* 11:00 am: Seminar in Gates-Thomas

=== Friday ===
* 8:45 am: Reed and Leo
* 9:30 am: Ania
* 10:15 am: Vipul/Anandh (system ID etc)
* 11 am - 2 pm: off campus
* 2-5 pm: group discussions (sign up above)
* 5:00 pm: Done for the day

Mary Dunlop, Oct 2017

2017-10-19T01:50:11Z

Rmccarde: /* Topic #2: feedback control of biological systems */

Mary Dunlop will visit Caltech on 19-20 Oct 2017. __NOTOC__

== Topics ==

Richard will organize a set of discussions with Mary on different topics. If you are interested in joining in the discussions, sign up below. You should put your name and any constraints on your time.

{| border=1
|- valign=top
| width=33% |
==== Topic #1: mutational robustness ====
* Richard - available 1-5 pm
* Anandh - 24/7/365
* Rory - 1-5pm (skype)
* Reed - available 1-5pm
| width=33% |

==== Topic #2: feedback control of biological systems ====
* Richard - available 1-5 pm
* Ania - 1pm - 4pm
* Vipul - available 1-5p
* Reed - available 1-5pm
* Name - availability
| width=33% |

==== Topic #3: TX-TL (modeling and experiments) ====
* Richard - available 1-5 pm
* William - busy 1-4 pm
* Vipul - available 1-5p
* Name - availability
|}

==== Additional topics ====
* If you have an additional topic you would like to discuss, but it here.

== Schedule ==
To be filled out later.

==== Thursday ====
* 11:00 am: Seminar in Gates-Thomas

=== Friday ===
* 8:45 am: Open
* 9:30 am: Ania
* 10:15 am: Vipul/Anandh (system ID etc)
* 11 am - 2 pm: off campus
* 2-5 pm: group discussions (sign up above)
* 5:00 pm: Done for the day

Mary Dunlop, Oct 2017

2017-10-19T01:49:54Z

Rmccarde: /* Topic #1: mutational robustness */

Mary Dunlop will visit Caltech on 19-20 Oct 2017. __NOTOC__

== Topics ==

Richard will organize a set of discussions with Mary on different topics. If you are interested in joining in the discussions, sign up below. You should put your name and any constraints on your time.

{| border=1
|- valign=top
| width=33% |
==== Topic #1: mutational robustness ====
* Richard - available 1-5 pm
* Anandh - 24/7/365
* Rory - 1-5pm (skype)
* Reed - available 1-5pm
| width=33% |

==== Topic #2: feedback control of biological systems ====
* Richard - available 1-5 pm
* Ania - 1pm - 4pm
* Vipul - available 1-5p
* Name - availability
| width=33% |

==== Topic #3: TX-TL (modeling and experiments) ====
* Richard - available 1-5 pm
* William - busy 1-4 pm
* Vipul - available 1-5p
* Name - availability
|}

==== Additional topics ====
* If you have an additional topic you would like to discuss, but it here.

== Schedule ==
To be filled out later.

==== Thursday ====
* 11:00 am: Seminar in Gates-Thomas

=== Friday ===
* 8:45 am: Open
* 9:30 am: Ania
* 10:15 am: Vipul/Anandh (system ID etc)
* 11 am - 2 pm: off campus
* 2-5 pm: group discussions (sign up above)
* 5:00 pm: Done for the day

Group Schedule, Fall 2017

2017-10-02T20:06:30Z

Rmccarde: /* Week 7: 6 Nov - 10 Nov */

This page contains information about various upcoming events that are of interest to the group. __NOTOC__
{| width=60%
|- valign=top
| width=50% |
* [[Schedule|Richard's calendar (travel)]]
| width=50% |
* [[Group Schedule, Summer 2017]]
|}

The schedule for group and subgroup meetings is given below. Contact Richard if you need to change the schedule. Unless otherwise noted, here are the locations of the meetings:

:{| width=100%
|- valign=top
| width=30% |
* Biocircuits subgroup - 111 Keck
| width=30% |
* NCS subgroup - 110 Steele
| width=30% |
* Group meetings - 213 ANB
|}

{| width=100% border=1
|- valign=top

| width=25% |
=== Week 1: 25 Sep.- 29 Sep ===
'''Biocircuits: Tue, 10a-12p'''
* Miroslav
* Wolfgang
'''NCS: Wed, 10:30a-12p'''
* Ioannis


| width=25% |
=== Week 2: 2 Oct - 6 Oct ===
'''Biocircuits: Tue, 10a-12p'''
* Ania
* Leo
'''NCS: Wed, 10:30a-12p'''
* Karan Kalsi (PNNL)


| width=25% |
=== Week 3: 9 Oct - 13 Oct ===
'''Biocircuits: Tue, 10a-12p'''
* James
* Vipul
'''NCS: Wed, 10:30a-12p'''
* Jin


| width=25% |
=== Week 4: 16 Oct - 20 Oct ===
'''Biocircuits: Tue, 10a-12p'''
* Mark
* Anandh
* Note: this meeting may shift to either Mon or Fri
'''NCS: Wed, 10:30a-12p'''
* Jonathan
* Note: this meeting may shift to either Mon or Fri


|- valign=top

| width=25% |
=== Week 5: 23 Oct - 27 Oct ===
'''Biocircuits: Tue, 10a-12p'''
* Andrey
* Cindy
* Note: this meeting may shift to Mon
<hr>
* Richard out of town Tue-Fri

| width=25% |
=== Week 6: 30 Oct - 3 Nov ===
'''Biocircuits: Tue, 10a-12p'''
* Sam
* Reed
'''NCS: Wed, 10:30a-12p'''
* Sofie


| width=25% |

=== Week 7: 6 Nov - 10 Nov ===
'''Biocircuits: Tue, 10a-12p'''
* William
* Shan
'''NCS: Wed, 10:30a-12p'''
* Sumanth


| width=25% |

=== Week 8: 13 Nov - 17 Nov ===
'''Biocircuits: Tue, 10a-12p'''
* Michaelle
* Andy
'''NCS: Wed, 10:30a-12p'''
* Richard C
* Note: this meeting may shift to Mon
<hr>
* Richard out of town Wed-Fri

|- valign=top

| width=25% |
=== Week 9: 20 Nov - 24 Nov ===
'''Biocircuits: Tue, 10a-12p'''
* Rory
* Hold: Joe M
'''NCS: Wed, 10:30a-12p'''
* Karena
* Note: this meeting may shift to Mon
<hr>
* Richard out of town Tue-Fri

| width=25% |
=== Week 10: 27 Nov - 1 Dec ===
'''Biocircuits: Tue, 10a-12p'''
* Hold: rotation student
* Hold: undergrad
* Note: this meeting may shift to Mon
'''NCS: Wed, 10:30a-12p'''
* Tung Phan
* Note: this meeting may shift to Fri


| width=25% |

=== Week 11: 4 Dec - 8 Dec ===
'''Biocircuits: Tue, 10a-12p'''
* Hold: rotation student
* Hold: undergraduate
'''NCS: Wed, 10:30a-12p'''
* Hold: Petter Nilsson


| width=25% |
=== Week 12: 11 Dec - 15 Dec ===
* No meetings this week
* Richard out of town Mon-Fri


|}

Group Schedule, Fall 2017

2017-10-02T20:06:19Z

Rmccarde: /* Week 6: 30 Oct - 3 Nov */

This page contains information about various upcoming events that are of interest to the group. __NOTOC__
{| width=60%
|- valign=top
| width=50% |
* [[Schedule|Richard's calendar (travel)]]
| width=50% |
* [[Group Schedule, Summer 2017]]
|}

The schedule for group and subgroup meetings is given below. Contact Richard if you need to change the schedule. Unless otherwise noted, here are the locations of the meetings:

:{| width=100%
|- valign=top
| width=30% |
* Biocircuits subgroup - 111 Keck
| width=30% |
* NCS subgroup - 110 Steele
| width=30% |
* Group meetings - 213 ANB
|}

{| width=100% border=1
|- valign=top

| width=25% |
=== Week 1: 25 Sep.- 29 Sep ===
'''Biocircuits: Tue, 10a-12p'''
* Miroslav
* Wolfgang
'''NCS: Wed, 10:30a-12p'''
* Ioannis


| width=25% |
=== Week 2: 2 Oct - 6 Oct ===
'''Biocircuits: Tue, 10a-12p'''
* Ania
* Leo
'''NCS: Wed, 10:30a-12p'''
* Karan Kalsi (PNNL)


| width=25% |
=== Week 3: 9 Oct - 13 Oct ===
'''Biocircuits: Tue, 10a-12p'''
* James
* Vipul
'''NCS: Wed, 10:30a-12p'''
* Jin


| width=25% |
=== Week 4: 16 Oct - 20 Oct ===
'''Biocircuits: Tue, 10a-12p'''
* Mark
* Anandh
* Note: this meeting may shift to either Mon or Fri
'''NCS: Wed, 10:30a-12p'''
* Jonathan
* Note: this meeting may shift to either Mon or Fri


|- valign=top

| width=25% |
=== Week 5: 23 Oct - 27 Oct ===
'''Biocircuits: Tue, 10a-12p'''
* Andrey
* Cindy
* Note: this meeting may shift to Mon
<hr>
* Richard out of town Tue-Fri

| width=25% |
=== Week 6: 30 Oct - 3 Nov ===
'''Biocircuits: Tue, 10a-12p'''
* Sam
* Reed
'''NCS: Wed, 10:30a-12p'''
* Sofie


| width=25% |

=== Week 7: 6 Nov - 10 Nov ===
'''Biocircuits: Tue, 10a-12p'''
* William
* Reed
'''NCS: Wed, 10:30a-12p'''
* Sumanth


| width=25% |
=== Week 8: 13 Nov - 17 Nov ===
'''Biocircuits: Tue, 10a-12p'''
* Michaelle
* Andy
'''NCS: Wed, 10:30a-12p'''
* Richard C
* Note: this meeting may shift to Mon
<hr>
* Richard out of town Wed-Fri

|- valign=top

| width=25% |
=== Week 9: 20 Nov - 24 Nov ===
'''Biocircuits: Tue, 10a-12p'''
* Rory
* Hold: Joe M
'''NCS: Wed, 10:30a-12p'''
* Karena
* Note: this meeting may shift to Mon
<hr>
* Richard out of town Tue-Fri

| width=25% |
=== Week 10: 27 Nov - 1 Dec ===
'''Biocircuits: Tue, 10a-12p'''
* Hold: rotation student
* Hold: undergrad
* Note: this meeting may shift to Mon
'''NCS: Wed, 10:30a-12p'''
* Tung Phan
* Note: this meeting may shift to Fri


| width=25% |

=== Week 11: 4 Dec - 8 Dec ===
'''Biocircuits: Tue, 10a-12p'''
* Hold: rotation student
* Hold: undergraduate
'''NCS: Wed, 10:30a-12p'''
* Hold: Petter Nilsson


| width=25% |
=== Week 12: 11 Dec - 15 Dec ===
* No meetings this week
* Richard out of town Mon-Fri


|}

Group Schedule, Summer 2017

2017-07-17T04:43:06Z

Rmccarde: /* Week 11: 28 Aug - 1 Sep */

This page contains information about various upcoming events that are of interest to the group. __NOTOC__
{| width=60%
|- valign=top
| width=50% |
* [[Schedule|Richard's calendar (travel)]]
| width=50% |
* [[Group Schedule, Spring 2017]]
|}

The schedule for group and subgroup meetings is given below. Contact Richard if you need to change the schedule. Unless otherwise noted, here are the locations of the meetings:

:{| width=100%
|- valign=top
| width=30% |
* Biocircuits subgroup - 111 Keck
| width=30% |
* NCS subgroup - 110 Steele
| width=30% |
* Group meetings - 213 ANB
|}

{| width=100% border=1
|- valign=top

| width=25% |
=== Week 1: 19 Jun - 23 Jun ===
'''NCS: Mon, 10a-12p'''
* Introductions
* Sofie Haesaert
<hr>
* No biocircuits meeting

| width=25% |
=== Week 2: 26 Jun - 30 Jun ===
'''Biocircuits: Mon, 10a-12p'''
* Ania Baetica
* George Artavanis
<hr>
* BioCon project meeting: Mon, 12p-2p - 111 Keck
* SURF kickoff meeting: Mon, 2p-3:30p - 111 Keck
* No NCS meeting

| width=25% |
=== Week 3: 3 Jul - 7 Jul ===
'''Biocircuits: Wed, 10a-12p'''
* Vipul Singhal
* Yong Wu
'''NCS: Wed, 1p-3p''' - 114 Steele
* Tony Fragoso
* Jake Reher (Ames)

|- valign=top
| width=25% |
=== Week 4: 10 Jul - 14 Jul ===
'''Biocircuits: Mon, 10a-12p'''
* James Parkin
* Mark Prator
* Swati Agrawal
'''NCS: Tue, 10a-12p'''
* Sumanth Dathathri
* Yashwanth Nakka (Chung)

| width=25% |

=== Week 5: 17 Jul - 21 Jul ===
* No group meetings, Richard out of town
'''Biocircuits: Mon, 11a-12p'''
* Lab cleanup

| width=25% |
=== Week 6: 24 Jul - 28 Jul ===
'''Biocircuits: Tue, 10a-12p'''
* William Poole
* Shaobin Guo
'''NCS: Tue, 1p-3p'''
* Richard Cheng
* Ellen Feldman (Burdick)

|- valign=top
| width=25% |

=== Week 7: 31 Jul - 4 Aug ===
'''Biocircuits: Tue, 10a-12p'''
* Leo Green
* Sam Clamons
'''NCS: Wed, 10a-12p'''
* Ioannis Filippidis
* Wen-Loong Ma (Ames)

| width=25% |

=== Week 8: 7 Aug - 11 Aug ===
'''Biocircuits: Tue, 10a-12p'''
* SURF students
'''NCS: Wed, 10a-12p'''
* SURF students
<hr>
* BioCon project meeting: Mon, 10a-12p

| width=25% |
=== Week 9: 14 Aug - 18 Aug ===
'''Biocircuits: Tue, 10a-12p'''
* Andrey Shur
* Cindy Ren
* Note: this meeting will probably shift to Thu, 10a-12p - 114 Steele
'''NCS: Wed, 10a-12p'''
* Jin Ge (tentative)
* Matt Burkhardt (Burdick)
* Note: this meeting will probably shift to Thu, 1-3p - 114 Steele

|- valign=top
| width=25% |

=== Week 10: 21 Aug - 25 Aug ===
'''Biocircuits: Tue, 10a-12p'''
* Shan Huang
* Anand Swaminathan
'''NCS: Wed, 10a-12p'''
* Karena Cai
* Thomas Gurriet (Ames)

| width=25% |

=== Week 11: 28 Aug - 1 Sep ===
'''Biocircuits: Tue, 10a-12p'''
* Andy Halleran
* Reed McCardell
'''NCS: Wed, 10a-12p'''
* Tung Phan
* Francesca Baldini (Chung)
* Note: this meeting will likely shift to Thu (31 Aug) - 114 Steele

| width=25% |

=== Week 12: 4 Sep - 8 Sep ===
* No group meetings, Richard out of town

|- valign=top
| width=25% |
=== Week 13: 11 Sep - 15 Sep ===
* No group meetings, Richard out of town
'''Biocircuits: Mon, 11a-12p'''
* Lab cleanup

| width=25% |
=== Week 14: 18 Sep - 22 Sep ===
'''Biocircuits: Mon, 12p-2p'''
* Michaelle Mayalu
* Rory Williams
<hr>
* BioCon project meeting: Mon, 10a-12p
* No NCS group meeting

| width=25% |
=== Week 15: 25 Sep - 29 Sep ===
* First week of classes; see [[Group Schedule, Fall 2017|fall term schedule]]
|}

Group Schedule, Summer 2017

2017-07-17T04:42:51Z

Rmccarde: /* Week 10: 21 Aug - 25 Aug */

This page contains information about various upcoming events that are of interest to the group. __NOTOC__
{| width=60%
|- valign=top
| width=50% |
* [[Schedule|Richard's calendar (travel)]]
| width=50% |
* [[Group Schedule, Spring 2017]]
|}

The schedule for group and subgroup meetings is given below. Contact Richard if you need to change the schedule. Unless otherwise noted, here are the locations of the meetings:

:{| width=100%
|- valign=top
| width=30% |
* Biocircuits subgroup - 111 Keck
| width=30% |
* NCS subgroup - 110 Steele
| width=30% |
* Group meetings - 213 ANB
|}

{| width=100% border=1
|- valign=top

| width=25% |
=== Week 1: 19 Jun - 23 Jun ===
'''NCS: Mon, 10a-12p'''
* Introductions
* Sofie Haesaert
<hr>
* No biocircuits meeting

| width=25% |
=== Week 2: 26 Jun - 30 Jun ===
'''Biocircuits: Mon, 10a-12p'''
* Ania Baetica
* George Artavanis
<hr>
* BioCon project meeting: Mon, 12p-2p - 111 Keck
* SURF kickoff meeting: Mon, 2p-3:30p - 111 Keck
* No NCS meeting

| width=25% |
=== Week 3: 3 Jul - 7 Jul ===
'''Biocircuits: Wed, 10a-12p'''
* Vipul Singhal
* Yong Wu
'''NCS: Wed, 1p-3p''' - 114 Steele
* Tony Fragoso
* Jake Reher (Ames)

|- valign=top
| width=25% |
=== Week 4: 10 Jul - 14 Jul ===
'''Biocircuits: Mon, 10a-12p'''
* James Parkin
* Mark Prator
* Swati Agrawal
'''NCS: Tue, 10a-12p'''
* Sumanth Dathathri
* Yashwanth Nakka (Chung)

| width=25% |

=== Week 5: 17 Jul - 21 Jul ===
* No group meetings, Richard out of town
'''Biocircuits: Mon, 11a-12p'''
* Lab cleanup

| width=25% |
=== Week 6: 24 Jul - 28 Jul ===
'''Biocircuits: Tue, 10a-12p'''
* William Poole
* Shaobin Guo
'''NCS: Tue, 1p-3p'''
* Richard Cheng
* Ellen Feldman (Burdick)

|- valign=top
| width=25% |

=== Week 7: 31 Jul - 4 Aug ===
'''Biocircuits: Tue, 10a-12p'''
* Leo Green
* Sam Clamons
'''NCS: Wed, 10a-12p'''
* Ioannis Filippidis
* Wen-Loong Ma (Ames)

| width=25% |

=== Week 8: 7 Aug - 11 Aug ===
'''Biocircuits: Tue, 10a-12p'''
* SURF students
'''NCS: Wed, 10a-12p'''
* SURF students
<hr>
* BioCon project meeting: Mon, 10a-12p

| width=25% |
=== Week 9: 14 Aug - 18 Aug ===
'''Biocircuits: Tue, 10a-12p'''
* Andrey Shur
* Cindy Ren
* Note: this meeting will probably shift to Thu, 10a-12p - 114 Steele
'''NCS: Wed, 10a-12p'''
* Jin Ge (tentative)
* Matt Burkhardt (Burdick)
* Note: this meeting will probably shift to Thu, 1-3p - 114 Steele

|- valign=top
| width=25% |

=== Week 10: 21 Aug - 25 Aug ===
'''Biocircuits: Tue, 10a-12p'''
* Shan Huang
* Anand Swaminathan
'''NCS: Wed, 10a-12p'''
* Karena Cai
* Thomas Gurriet (Ames)

| width=25% |

=== Week 11: 28 Aug - 1 Sep ===
'''Biocircuits: Tue, 10a-12p'''
* Andy Halleran
* Shan Huang
'''NCS: Wed, 10a-12p'''
* Tung Phan
* Francesca Baldini (Chung)
* Note: this meeting will likely shift to Thu (31 Aug) - 114 Steele

| width=25% |

=== Week 12: 4 Sep - 8 Sep ===
* No group meetings, Richard out of town

|- valign=top
| width=25% |
=== Week 13: 11 Sep - 15 Sep ===
* No group meetings, Richard out of town
'''Biocircuits: Mon, 11a-12p'''
* Lab cleanup

| width=25% |
=== Week 14: 18 Sep - 22 Sep ===
'''Biocircuits: Mon, 12p-2p'''
* Michaelle Mayalu
* Rory Williams
<hr>
* BioCon project meeting: Mon, 10a-12p
* No NCS group meeting

| width=25% |
=== Week 15: 25 Sep - 29 Sep ===
* First week of classes; see [[Group Schedule, Fall 2017|fall term schedule]]
|}

May 2017 meeting schedule

2017-05-08T16:30:36Z

Rmccarde: /* 15 May (Mon) */

Richard will be in town several different times in May. Please sign up for a time to meet below. Please note that these are likely the last "sabbatical" meetings until Richard returns to Pasadena in early July. __NOTOC__

{| border=1 width=100%
|- valign=top
| width=33% |
| width=33% |
==== 15 May (Mon) ====
* 9:30 am: Open
* 10:15 am: Open
* 11:00 am: Faculty meeting
* 11:30 am: Open
* 12:15 pm: Lunch
* 1:30 pm: Open
* 2:15 pm: Reed
* 3:00 pm: Open
* 3:45 pm: Break
* 4:00 pm: Namita
* 4:45 pm: Open
* 5:30 pm: Open
* 6:15 pm: Done for the day

| width=33% |

==== 16 May (Tue)====
* 9:30 am: Yong
* 10:15 am: Tung
* 11:00 am: Faculty meeting
* 12:00 pm: Lunch
* 1:30 pm: Depart
* 12:00 pm: Lunch
* 1:30 pm: Depart

|- valign=top
| width=33% |

====21 May (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Break
* 4:15 pm: Open
* 5:00 pm: Open
* 5:45 pm: Open
* 6:30 pm: Done for the day

| width=33% |

==== 22 May (Mon) ====
* 10:15 am: Mark
* 11:00 am: Cindy
* 11:45 am: Lunch
* 12:00 pm: DARPA BioCon meeting
* 2:00 pm: Swati + Reed
* 2:45 pm: Off campus
* 4:15 pm: James
* 5:00 pm: Non-Caltech meetings
* 6:30 pm: Done for the day

| width=33% |

==== 23 May (Tue) ====
* 9:30 am: Faculty discussion
* 10:30 am: Hold (Susan)
* 11:30 am: Lunch
* 12:00 pm: Telecon
* 1:00 pm: Anu thesis defense
* 3:00 pm: Terri (?)
* 3:30 pm: Depart

|- valign=top
| width=33% |

====28 May (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Done for the day
| width=33% |
====29 May (Mon) ====
* 1:45 pm: Open (if needed)
* 2:30 pm: Open (if needed)
* 3:15 pm: Open (if needed)
* 4:00 pm: Done for the day
| width=33% |

==== 30 May (Tue) ====
* 9:30 am: Open
* 10:15 am: Shaobin
* 11:00 am: Stepan seminar
* 12:00 pm: Lunch
* 1:30 pm: Namita
* 2:15 pm: Andrey
* 3:00 pm: Depart
|}

May 2017 meeting schedule

2017-05-08T16:30:15Z

Rmccarde: /* 22 May (Mon) */

Richard will be in town several different times in May. Please sign up for a time to meet below. Please note that these are likely the last "sabbatical" meetings until Richard returns to Pasadena in early July. __NOTOC__

{| border=1 width=100%
|- valign=top
| width=33% |
| width=33% |
==== 15 May (Mon) ====
* 9:30 am: Open
* 10:15 am: Open
* 11:00 am: Faculty meeting
* 11:30 am: Open
* 12:15 pm: Lunch
* 1:30 pm: Open
* 2:15 pm: Open
* 3:00 pm: Open
* 3:45 pm: Break
* 4:00 pm: Namita
* 4:45 pm: Open
* 5:30 pm: Open
* 6:15 pm: Done for the day

| width=33% |

==== 16 May (Tue)====
* 9:30 am: Yong
* 10:15 am: Tung
* 11:00 am: Faculty meeting
* 12:00 pm: Lunch
* 1:30 pm: Depart
* 12:00 pm: Lunch
* 1:30 pm: Depart

|- valign=top
| width=33% |

====21 May (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Break
* 4:15 pm: Open
* 5:00 pm: Open
* 5:45 pm: Open
* 6:30 pm: Done for the day

| width=33% |

==== 22 May (Mon) ====
* 10:15 am: Mark
* 11:00 am: Cindy
* 11:45 am: Lunch
* 12:00 pm: DARPA BioCon meeting
* 2:00 pm: Swati + Reed
* 2:45 pm: Off campus
* 4:15 pm: James
* 5:00 pm: Non-Caltech meetings
* 6:30 pm: Done for the day

| width=33% |

==== 23 May (Tue) ====
* 9:30 am: Faculty discussion
* 10:30 am: Hold (Susan)
* 11:30 am: Lunch
* 12:00 pm: Telecon
* 1:00 pm: Anu thesis defense
* 3:00 pm: Terri (?)
* 3:30 pm: Depart

|- valign=top
| width=33% |

====28 May (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Done for the day
| width=33% |
====29 May (Mon) ====
* 1:45 pm: Open (if needed)
* 2:30 pm: Open (if needed)
* 3:15 pm: Open (if needed)
* 4:00 pm: Done for the day
| width=33% |

==== 30 May (Tue) ====
* 9:30 am: Open
* 10:15 am: Shaobin
* 11:00 am: Stepan seminar
* 12:00 pm: Lunch
* 1:30 pm: Namita
* 2:15 pm: Andrey
* 3:00 pm: Depart
|}

May 2017 meeting schedule

2017-05-08T16:29:37Z

Rmccarde: /* 15 May (Mon) */

Richard will be in town several different times in May. Please sign up for a time to meet below. Please note that these are likely the last "sabbatical" meetings until Richard returns to Pasadena in early July. __NOTOC__

{| border=1 width=100%
|- valign=top
| width=33% |
| width=33% |
==== 15 May (Mon) ====
* 9:30 am: Open
* 10:15 am: Open
* 11:00 am: Faculty meeting
* 11:30 am: Open
* 12:15 pm: Lunch
* 1:30 pm: Open
* 2:15 pm: Open
* 3:00 pm: Open
* 3:45 pm: Break
* 4:00 pm: Namita
* 4:45 pm: Open
* 5:30 pm: Open
* 6:15 pm: Done for the day

| width=33% |

==== 16 May (Tue)====
* 9:30 am: Yong
* 10:15 am: Tung
* 11:00 am: Faculty meeting
* 12:00 pm: Lunch
* 1:30 pm: Depart
* 12:00 pm: Lunch
* 1:30 pm: Depart

|- valign=top
| width=33% |

====21 May (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Break
* 4:15 pm: Open
* 5:00 pm: Open
* 5:45 pm: Open
* 6:30 pm: Done for the day

| width=33% |

==== 22 May (Mon) ====
* 10:15 am: Mark
* 11:00 am: Cindy
* 11:45 am: Lunch
* 12:00 pm: DARPA BioCon meeting
* 2:00 pm: Open
* 2:45 pm: Off campus
* 4:15 pm: James
* 5:00 pm: Non-Caltech meetings
* 6:30 pm: Done for the day

| width=33% |

==== 23 May (Tue) ====
* 9:30 am: Faculty discussion
* 10:30 am: Hold (Susan)
* 11:30 am: Lunch
* 12:00 pm: Telecon
* 1:00 pm: Anu thesis defense
* 3:00 pm: Terri (?)
* 3:30 pm: Depart

|- valign=top
| width=33% |

====28 May (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Done for the day
| width=33% |
====29 May (Mon) ====
* 1:45 pm: Open (if needed)
* 2:30 pm: Open (if needed)
* 3:15 pm: Open (if needed)
* 4:00 pm: Done for the day
| width=33% |

==== 30 May (Tue) ====
* 9:30 am: Open
* 10:15 am: Shaobin
* 11:00 am: Stepan seminar
* 12:00 pm: Lunch
* 1:30 pm: Namita
* 2:15 pm: Andrey
* 3:00 pm: Depart
|}

May 2017 meeting schedule

2017-05-08T16:25:18Z

Rmccarde: /* 15 May (Mon) */

Richard will be in town several different times in May. Please sign up for a time to meet below. Please note that these are likely the last "sabbatical" meetings until Richard returns to Pasadena in early July. __NOTOC__

{| border=1 width=100%
|- valign=top
| width=33% |
| width=33% |
==== 15 May (Mon) ====
* 9:30 am: Open
* 10:15 am: Open
* 11:00 am: Faculty meeting
* 11:30 am: Open
* 12:15 pm: Lunch
* 1:30 pm: Open
* 2:15 pm: Reed
* 3:00 pm: Swati + Reed
* 3:45 pm: Break
* 4:00 pm: Namita
* 4:45 pm: Open
* 5:30 pm: Open
* 6:15 pm: Done for the day

| width=33% |

==== 16 May (Tue)====
* 9:30 am: Yong
* 10:15 am: Tung
* 11:00 am: Faculty meeting
* 12:00 pm: Lunch
* 1:30 pm: Depart
* 12:00 pm: Lunch
* 1:30 pm: Depart

|- valign=top
| width=33% |

====21 May (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Break
* 4:15 pm: Open
* 5:00 pm: Open
* 5:45 pm: Open
* 6:30 pm: Done for the day

| width=33% |

==== 22 May (Mon) ====
* 10:15 am: Mark
* 11:00 am: Cindy
* 11:45 am: Lunch
* 12:00 pm: DARPA BioCon meeting
* 2:00 pm: Open
* 2:45 pm: Off campus
* 4:15 pm: Open
* 5:00 pm: Non-Caltech meetings
* 6:30 pm: Done for the day

| width=33% |

==== 23 May (Tue) ====
* 9:30 am: Faculty discussion
* 10:30 am: Hold (Susan)
* 11:30 am: Lunch
* 12:00 pm: Telecon
* 1:00 pm: Anu thesis defense
* 3:00 pm: Terri (?)
* 3:30 pm: Depart

|- valign=top
| width=33% |

====28 May (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Done for the day
| width=33% |
====29 May (Mon) ====
* 1:45 pm: Open (if needed)
* 2:30 pm: Open (if needed)
* 3:15 pm: Open (if needed)
* 4:00 pm: Done for the day
| width=33% |

==== 30 May (Tue) ====
* 9:30 am: Open
* 10:15 am: Shaobin
* 11:00 am: Stepan seminar
* 12:00 pm: Lunch
* 1:30 pm: Namita
* 2:15 pm: Andrey
* 3:00 pm: Depart
|}

May 2017 meeting schedule

2017-05-08T16:24:50Z

Rmccarde: /* 22 May (Mon) */

Richard will be in town several different times in May. Please sign up for a time to meet below. Please note that these are likely the last "sabbatical" meetings until Richard returns to Pasadena in early July. __NOTOC__

{| border=1 width=100%
|- valign=top
| width=33% |
| width=33% |
==== 15 May (Mon) ====
* 9:30 am: Open
* 10:15 am: Open
* 11:00 am: Faculty meeting
* 11:30 am: Open
* 12:15 pm: Lunch
* 1:30 pm: Open
* 2:15 pm: Reed
* 3:00 pm: Reed + Swati
* 3:45 pm: Break
* 4:00 pm: Namita
* 4:45 pm: Open
* 5:30 pm: Open
* 6:15 pm: Done for the day

| width=33% |

==== 16 May (Tue)====
* 9:30 am: Yong
* 10:15 am: Tung
* 11:00 am: Faculty meeting
* 12:00 pm: Lunch
* 1:30 pm: Depart
* 12:00 pm: Lunch
* 1:30 pm: Depart

|- valign=top
| width=33% |

====21 May (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Break
* 4:15 pm: Open
* 5:00 pm: Open
* 5:45 pm: Open
* 6:30 pm: Done for the day

| width=33% |

==== 22 May (Mon) ====
* 10:15 am: Mark
* 11:00 am: Cindy
* 11:45 am: Lunch
* 12:00 pm: DARPA BioCon meeting
* 2:00 pm: Open
* 2:45 pm: Off campus
* 4:15 pm: Open
* 5:00 pm: Non-Caltech meetings
* 6:30 pm: Done for the day

| width=33% |

==== 23 May (Tue) ====
* 9:30 am: Faculty discussion
* 10:30 am: Hold (Susan)
* 11:30 am: Lunch
* 12:00 pm: Telecon
* 1:00 pm: Anu thesis defense
* 3:00 pm: Terri (?)
* 3:30 pm: Depart

|- valign=top
| width=33% |

====28 May (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Done for the day
| width=33% |
====29 May (Mon) ====
* 1:45 pm: Open (if needed)
* 2:30 pm: Open (if needed)
* 3:15 pm: Open (if needed)
* 4:00 pm: Done for the day
| width=33% |

==== 30 May (Tue) ====
* 9:30 am: Open
* 10:15 am: Shaobin
* 11:00 am: Stepan seminar
* 12:00 pm: Lunch
* 1:30 pm: Namita
* 2:15 pm: Andrey
* 3:00 pm: Depart
|}

May 2017 meeting schedule

2017-05-08T16:24:26Z

Rmccarde: /* 15 May (Mon) */

Richard will be in town several different times in May. Please sign up for a time to meet below. Please note that these are likely the last "sabbatical" meetings until Richard returns to Pasadena in early July. __NOTOC__

{| border=1 width=100%
|- valign=top
| width=33% |
| width=33% |
==== 15 May (Mon) ====
* 9:30 am: Open
* 10:15 am: Open
* 11:00 am: Faculty meeting
* 11:30 am: Open
* 12:15 pm: Lunch
* 1:30 pm: Open
* 2:15 pm: Reed
* 3:00 pm: Reed + Swati
* 3:45 pm: Break
* 4:00 pm: Namita
* 4:45 pm: Open
* 5:30 pm: Open
* 6:15 pm: Done for the day

| width=33% |

==== 16 May (Tue)====
* 9:30 am: Yong
* 10:15 am: Tung
* 11:00 am: Faculty meeting
* 12:00 pm: Lunch
* 1:30 pm: Depart
* 12:00 pm: Lunch
* 1:30 pm: Depart

|- valign=top
| width=33% |

====21 May (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Break
* 4:15 pm: Open
* 5:00 pm: Open
* 5:45 pm: Open
* 6:30 pm: Done for the day

| width=33% |

==== 22 May (Mon) ====
* 10:15 am: Mark
* 11:00 am: Cindy
* 11:45 am: Lunch
* 12:00 pm: DARPA BioCon meeting
* 2:00 pm: Reed
* 2:45 pm: Off campus
* 4:15 pm: Open
* 5:00 pm: Non-Caltech meetings
* 6:30 pm: Done for the day

| width=33% |

==== 23 May (Tue) ====
* 9:30 am: Faculty discussion
* 10:30 am: Hold (Susan)
* 11:30 am: Lunch
* 12:00 pm: Telecon
* 1:00 pm: Anu thesis defense
* 3:00 pm: Terri (?)
* 3:30 pm: Depart

|- valign=top
| width=33% |

====28 May (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Done for the day
| width=33% |
====29 May (Mon) ====
* 1:45 pm: Open (if needed)
* 2:30 pm: Open (if needed)
* 3:15 pm: Open (if needed)
* 4:00 pm: Done for the day
| width=33% |

==== 30 May (Tue) ====
* 9:30 am: Open
* 10:15 am: Shaobin
* 11:00 am: Stepan seminar
* 12:00 pm: Lunch
* 1:30 pm: Namita
* 2:15 pm: Andrey
* 3:00 pm: Depart
|}

May 2017 meeting schedule

2017-05-08T16:20:20Z

Rmccarde: /* 22 May (Mon) */

Richard will be in town several different times in May. Please sign up for a time to meet below. Please note that these are likely the last "sabbatical" meetings until Richard returns to Pasadena in early July. __NOTOC__

{| border=1 width=100%
|- valign=top
| width=33% |
| width=33% |
==== 15 May (Mon) ====
* 9:30 am: Open
* 10:15 am: Open
* 11:00 am: Faculty meeting
* 11:30 am: Open
* 12:15 pm: Lunch
* 1:30 pm: Open
* 2:15 pm: Open
* 3:00 pm: Open
* 3:45 pm: Break
* 4:00 pm: Namita
* 4:45 pm: Open
* 5:30 pm: Open
* 6:15 pm: Done for the day

| width=33% |

==== 16 May (Tue)====
* 9:30 am: Yong
* 10:15 am: Tung
* 11:00 am: Faculty meeting
* 12:00 pm: Lunch
* 1:30 pm: Depart
* 12:00 pm: Lunch
* 1:30 pm: Depart

|- valign=top
| width=33% |

====21 May (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Break
* 4:15 pm: Open
* 5:00 pm: Open
* 5:45 pm: Open
* 6:30 pm: Done for the day

| width=33% |

==== 22 May (Mon) ====
* 10:15 am: Mark
* 11:00 am: Cindy
* 11:45 am: Lunch
* 12:00 pm: DARPA BioCon meeting
* 2:00 pm: Reed
* 2:45 pm: Off campus
* 4:15 pm: Open
* 5:00 pm: Non-Caltech meetings
* 6:30 pm: Done for the day

| width=33% |

==== 23 May (Tue) ====
* 9:30 am: Faculty discussion
* 10:30 am: Hold (Susan)
* 11:30 am: Lunch
* 12:00 pm: Telecon
* 1:00 pm: Anu thesis defense
* 3:00 pm: Terri (?)
* 3:30 pm: Depart

|- valign=top
| width=33% |

====28 May (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Done for the day
| width=33% |
====29 May (Mon) ====
* 1:45 pm: Open (if needed)
* 2:30 pm: Open (if needed)
* 3:15 pm: Open (if needed)
* 4:00 pm: Done for the day
| width=33% |

==== 30 May (Tue) ====
* 9:30 am: Open
* 10:15 am: Shaobin
* 11:00 am: Stepan seminar
* 12:00 pm: Lunch
* 1:30 pm: Namita
* 2:15 pm: Andrey
* 3:00 pm: Depart
|}

Apr 2017 meeting schedule

2017-04-12T20:05:51Z

Rmccarde: /* 20 Apr (Thu) */

Richard will be in town 19-21 Apr. Please sign up for a time to meet below. __NOTOC__

{| border=1
|- valign=top
| width=25% |
==== 19 Apr (Wed) ====
* 9:30 am: Hold (Sofie or Leo)
* 10:30 am: Admin meeting (SP, MC)
* 11:15 am: Shaobin
* 12:00 pm: DARPA BioCon meeting
* 2:00 pm: Candidacy exam
* 3:00 pm: CDS tea
* 3:45 pm: Yong
* 4:30 pm: Admin meeting (LL)
* 5:00 pm: Reed (tentative)
* 5:45 pm: Associates event

| width=25% |

==== 20 Apr (Thu) ====
* 9:30 am: Hold (Sofie or Leo)
* 10:30 am: Mark
* 11:15 am: Tony Fragoso
* 12:00 pm: Lunch
* 1:30 pm: EBRC telecon
* 2:30 pm: Anandh
* 3:15 pm: James
* 4:00 pm: Vipul
* 4:45 pm: Break
* 5:00 pm: Tung
* 5:45 pm: Sam
* 6:00 pm: Reed (if NOT 19 Apr Wed 1700)
* 6:45 pm: Open (if needed)
* 7:30 pm: Done for the day

| width=25% |

==== 21 Apr (Fri) ====
* 9:15 am: Open
* 10:00 am: JPL CIF meeting
* 11:15 am: Karena
* 12:00 pm: Lunch
* 12:45 pm: William
* 1:30 pm: Namita
* 2:15 pm: Open
* 3:00 pm: Break
* 3:15 pm: Open
* 4:00 pm: Miki
* 4:45 pm: Ania
* 5:30 pm: Done for the day

| width=25% |

==== 23 Apr (Sun) ====
* 1:45 pm: Anu
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Break
* 4:15 pm: Open
* 5:00 pm: Sumanth
* 5:45 pm: Shan
* 6:30 pm: Done for the day
|}

Apr 2017 meeting schedule

2017-04-12T20:05:16Z

Rmccarde: /* 19 Apr (Wed) */

Richard will be in town 19-21 Apr. Please sign up for a time to meet below. __NOTOC__

{| border=1
|- valign=top
| width=25% |
==== 19 Apr (Wed) ====
* 9:30 am: Hold (Sofie or Leo)
* 10:30 am: Admin meeting (SP, MC)
* 11:15 am: Shaobin
* 12:00 pm: DARPA BioCon meeting
* 2:00 pm: Candidacy exam
* 3:00 pm: CDS tea
* 3:45 pm: Yong
* 4:30 pm: Admin meeting (LL)
* 5:00 pm: Reed (tentative)
* 5:45 pm: Associates event

| width=25% |

==== 20 Apr (Thu) ====
* 9:30 am: Hold (Sofie or Leo)
* 10:30 am: Mark
* 11:15 am: Tony Fragoso
* 12:00 pm: Lunch
* 1:30 pm: EBRC telecon
* 2:30 pm: Anandh
* 3:15 pm: James
* 4:00 pm: Vipul
* 4:45 pm: Break
* 5:00 pm: Tung
* 5:45 pm: Sam
* 6:00 pm: Open (if needed)
* 6:45 pm: Open (if needed)
* 7:30 pm: Done for the day

| width=25% |

==== 21 Apr (Fri) ====
* 9:15 am: Open
* 10:00 am: JPL CIF meeting
* 11:15 am: Karena
* 12:00 pm: Lunch
* 12:45 pm: William
* 1:30 pm: Namita
* 2:15 pm: Open
* 3:00 pm: Break
* 3:15 pm: Open
* 4:00 pm: Miki
* 4:45 pm: Ania
* 5:30 pm: Done for the day

| width=25% |

==== 23 Apr (Sun) ====
* 1:45 pm: Anu
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Break
* 4:15 pm: Open
* 5:00 pm: Sumanth
* 5:45 pm: Shan
* 6:30 pm: Done for the day
|}

Mar 2017 meeting schedule

2017-02-26T23:26:36Z

Rmccarde: /* 3 Mar (Fri) */

Richard will be in town 3-7 Mar. Please sign up for a time to meet below. __NOTOC__

{| border=1
|- valign=top
| width=25% |
==== 3 Mar (Fri) ====
* 10:00 am: DENSO CPM telecon
* 11:00 am: Reed
* 11:45 am: Shaobin
* 12:30 pm: Lunch
* 1:00 pm: Hold: DARPA telecon
* 2:00 pm: Open
* 2:45 pm: Open
* 3:30 pm: SBIR telecon (w/ Mark P)
* 4:00 pm: Faculty meeting
* 5:45 pm: Sumanth Dathathri
* 6:30 pm: Done for the day

| width=25% |

==== 5 Mar (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Open
* 4:00 pm: Break
* 4:15 pm: Open
* 5:00 pm: Open
* 5:45 pm: Open
* 6:30 pm: Done for the day

| width=25% |

==== 6 Mar (Mon) ====
* 9:30 am: AFOSR BRI telecon
* 10:30 am: Yong
* 11:15 am: Fragoso
* 12:00 pm: Lunch
* 12:30 pm: Hold: DARPA telecon
* 1:30 pm: Open
* 2:15 pm: Ioannis
* 3:00 pm: Open
* 3:45 pm: Break
* 4:00 pm: James
* 4:45 pm: Open
* 5:30 pm: Open
* 6:15 pm: Done for the day

| width=25% |

==== 7 Mar (Tue) ====
* 9:30 am: Busy
* 10:15 am: Tung
* 11:00 am: Hold: DARPA telecon
* 12:00 pm: Lunch
* 12:45 pm: Hold
* 1:15 pm: Andrew M
* 2:00 pm: Andy Halleran
* 2:45 pm: Depart for airport
|}

SURF discussions, Jan 2017

2017-01-24T05:39:13Z

Rmccarde: /* 27 Jan (Fri) */

Slots for talking with applicants and co-mentors about SURF projects. Please sign up for one of the slots below. All times are PST. __NOTOC__

In preparation for our conversation, please do the following:
* SURF students should work with their co-mentors to find a time the meeting/Skype call. (For Skype calls, co-mentors should initiate.)
* Please make sure you have read the material in the description of your project, so that you are prepared to talk about what the project is about and we can narrow in on the key ideas that will be the basis of your proposal
* Please take a look at the [[SURF GOTChA chart]] page, which is the format that we will use for the first iteration of your project proposal.

{| width=100% border=1
|- valign=top
|
==== 25 Jan (Wed) ====
* 8:30 am PST: open
<hr>
* 11:00 am PST: open
<hr>
* 3:00 pm PST: open
* 3:30 pm PST: open
|

==== 26 Jan (Thu) ====
* 1:00 pm PST: open
* 1:30 pm PST: open
<hr>
* 6:30 pm PST: open
* 7:00 pm PST: open
|

==== 27 Jan (Fri) ====
* 9:00 am PST: Joy Doong and James Parkin
* 9:30 am PST: Swati Agrawal and Reed McCardell
* 10:00 am PST: open
* 10:30 am PST: open

|}

The agenda for the phone call is (roughly):

# Description of the basic idea behind the project (based on applicant's understanding)
# Discussion about approaches, things to read, variations to consider, etc
# Discussion of the format of the proposal
# Questions and discussion about the process

Jan 2017 meeting schedule

2017-01-13T19:27:04Z

Rmccarde: /* 20 Jan (Fri) */

Richard will be in town 20-24 Jan. Please sign up for a time to meet below. __NOTOC__

{| border=1
|- valign=top
| width=25% |
==== 20 Jan (Fri) ====
* Richard arrives on campus ~9:45 am
* 10:15 am: Mark
* 11:00 am: Yong
* 11:45 am: Anandh
* 12:30 pm: Lunch
* 1:30 pm: Yong and Frances A
* 2:30 pm: Sumanth Dathathri
* 3:15 pm: Reed
* 4:00 pm: Miki
* 4:45 pm: Break
* 5:00 pm: Cindy
* 5:45 pm: Open
* 6:30 pm: Done for the day

| width=25% |

==== 22 Jan (Sun) ====
* 1:45 pm: Open
* 2:30 pm: Open
* 3:15 pm: Rory
* 4:00 pm: Break
* 4:15 pm: Open
* 5:00 pm: Open
* 5:45 pm: Open
* 6:30 pm: Done for the day

| width=25% |

==== 23 Jan (Mon) ====
* 8:00 am: Michaelle
* 9:00 am: Hold: Jaymie
* 10:00 am: BioCon meeting
* 12:00 pm: Seminar ([[Michaëlle Mayalu, Jan 2017|Michaelle]])
* 1:00 pm: Hold until needed
* 1:45 pm: Open
* 2:30 pm: CDS faculty meeting
* 4:15 pm: Tony Fragoso
* 5:00 pm: Ania
* 5:45 pm: Open
* 6:30 pm: Dinner with visitors

| width=25% |

==== 24 Jan (Tue) ====
* 9:45 am: Henrike
* 10:30 am: Karena
* 11:15 am: Tung
* 12:00 pm: Seminar ([[Henrike Niederholtmeyer, Jan 2017|Henrike]])
* 1:15 pm: [[Michaëlle Mayalu, Jan 2017|Michaelle]]
* 2:00 pm: Anu
* 2:45 pm: [[Henrike Niederholtmeyer, Jan 2017|Henrike]]
* 3:30 pm: Depart for airport
|}

SURF 2017: Synthetic modules for control of bacterial growth

2017-01-01T00:23:31Z

Rmccarde: Created page with "'''2017 SURF project description''' * Mentor: Richard Murray * Co-mentor: Reed McCardell, Anandh Swaminathan Complex consortia of microbes occur nearly everywhe..."

'''[[SURF 2017|2017 SURF]] project description'''
* Mentor: Richard Murray
* Co-mentor: Reed McCardell, Anandh Swaminathan

Complex consortia of microbes occur nearly everywhere in nature, including in the human body, and are implicated in a number of significant environmental and human physiological processes. The composition of a microbial community, particularly the resident community in the human GI tract, is dynamic in response to small and large changes in the environment outside and inside the host. In an attempt to build understanding and control of the dynamics of microbial community composition, we are working to design communities with various population level behaviors effected by synthetic controllers of bacterial growth.

The approach we are taking to this goal involves cell-cell communication between bacteria in culture, genetic circuits that translate population information into signals inside each cell and synthetic growth controllers activated or repressed by these intracellular signals. Together, modules performing each of these functions build a community of bacteria capable of reacting to its composition by slowing or speeding up growth of community members.

At the moment, genetic toxin/antitoxin systems, particularly ccdB/ccdA, are the most well-characterized and well-used growth controllers [1,2]. These are few and do not act with much dynamic range or diversity of mechanism. One big focus of our project is the development of a collection of growth control systems acting with different mechanisms, dynamic range and effect sizes. We envision using these controllers in combination or individually to enable various population level dynamics in bacterial communities.

Of particular interest to the co-mentor are two types of growth control that are very relevant to our understanding and control of natural microbial communities. One is control via secreted antibiotics, or bacteriocins (which has seen some investigation previously [3]), and the other is control via metabolic interdependency and resource availability. Metabolic population control has been achieved using genetically-modified auxotrophs [4], but we plan to investigate ways around genome modification in favor of plasmid based modules for metabolic control.

This SURF project will investigate one of these mechanisms of growth control with goals:
* Clone at least one effector and all its required component parts (bacteriocin +/- resistance gene; metabolic enzyme inhibitor/activator)
* Assess dynamic range, effect size off/on dynamics of growth controller(s)
* Develop a mathematical model for the action of growth controller(s)
* ''Think about other mechanisms of controlling bacterial growth (described below)''

The specific growth control topics presented above are ideas from the mentor and co-mentor, but we are open to mechanisms of growth control of all types. Students are encouraged to design controllers of their own with their mentors and investigate the parameters of action.

'''Required skills:''' Students should be comfortable with basic molecular biological techniques for cloning of genes and bacterial transformation. The work will be performed in bacteria and students should be familiar with bacterial culture. Quantification of growth control parameters is very important for efforts to computationally model growth control, and skills in programming and data analysis are required. Modeling of growth control will be based on differential equations; students should be familiar with the basics of differential equations mathematics.

References
# You, L., Cox, R. S., Weiss, R. & Arnold, F. H. Programmed population control by cell–cell communication and regulated killing. Nature 428, 868–871 (2004).
# Balagaddé, F. K. et al. A synthetic Escherichia coli predator-prey ecosystem. Mol. Syst. Biol. 4, 187 (2008).
# Weber, M. F., Poxleitner, G., Hebisch, E., Frey, E. & Opitz, M. Chemical warfare and survival strategies in bacterial range expansions. J. R. Soc. Interface 11, 20140172 (2014).
# Kerner, A., Park, J., Williams, A. & Lin, X. N. A programmable escherichia coli consortium via tunable symbiosis. PLoS One 7, 1–10 (2012).

Nov 2016 meeting schedule

2016-11-03T19:01:05Z

Rmccarde: /* 15 Nov (Tue) */

Richard will be in town 13-16 Nov. Please sign up for a time to meet below.
__NOTOC__

{| border=1
|- valign=top
| width=25% |

==== 13 Nov (Sun) ====
 
 
<hr>
* 2 pm: Hold until needed
* 2:45 pm: Hold until needed
* 3:30 pm: Hold until needed
* 4:15 pm: Break
* 5:00 pm: Hold until needed
* 5:45 pm: Hold until needed
* 6:30 pm: Done for the day

| width=25% |

==== 14 Nov (Mon) ====
* 10:30 am: Open
* 11:15 am: Tung
<hr>
* 1:30 pm: Open
* 2:15 pm: Andrey Shur
* 3:00 pm: Shaobin
* 3:45 pm: Break
* 4:00 pm: Open
* 4:45 pm: Open
* 5:30 pm: Open
* 6:15 pm: Done for the day
| width=25% |

====15 Nov (Tue) ====
* 10:30 am: Open
* 11:15 am: Reed
<hr>
* 1:30 pm: Open
* 2:15 pm: Open
* 3:00 pm: Tony Fragoso
* 3:45 pm: Break
* 4:00 pm: Open
* 4:45 pm: Open
* 5:30 pm: Open
* 6:15 pm: Done for the day
| width=25% |

==== 16 Nov (Wed) ====
* 10:30 am: Open
* 11:15 am: Open
<hr>
* 1:30 pm: Open
* 2:15 pm: Open
* 3:00 pm: CDS tea
* Depart for airport at ~4 pm
|}

Sep/Oct 2016 meeting schedule

2016-09-19T18:38:59Z

Rmccarde: /* 29 Sep (Thu) */

Richard will be in town 29 Sept - 3 Oct 2016. Please sign up for a time to meet below.
__NOTOC__

{| border=1
|- valign=top
| width=25% |
==== 29 Sep (Thu) ====
* Flying in from SF in the morning
* 1:00 pm: George
* 1:45 pm: Andrey
* 2:30 pm: Tony Fragoso
* 3:15 pm: Break
* 3:30 pm: Richard C.
* 4:15 pm: Sam
* 5:00 pm: Mark
* 5:45 pm: Break
* 6:00 pm: Reed
* 6:45 pm: Open
* 7:30 pm: Done for the day
| width=25% |

==== 30 Sep (Fri) ====
* Morning: busy with other meetings/phone calls
* 1:30-3:30 pm: Integrase project meeting (Victoria, Andrey, George, Sam, Ania, Cindy, Jining)
* 3:30 pm: Miki
* 4:30 pm: break
* 4:45 pm: Andrew
* 5:30 pm: Anandh
* 6:15 pm: Done for the day
| width=25% |

==== 2 Oct (Sun) ====
* 1:45 pm: YONG
* 2:30 pm: Open
* 3:15 pm: Karena
* 4:00 pm: Break
* 4:15 pm: Cindy
* 5:00 pm: Open
* 5:45 pm: Open
* 6:30 pm: Done for the day

| width=25% |

==== 3 Oct (Mon) ====
* 10 am - 12 pm: DARPA BioCon meeting
* 12:00 pm: Candidacy exam
* 1:45 pm: Jaymie
* 2:45 pm: Tung
* 3:30 pm: Shaobin
* 4:15 pm: Victoria
* 5:00 pm: Break
* 5:15 pm: Daniel N
* 6:00 pm: William
* 6:45 pm: Open
* 7:30 pm: Done for the day
|}

Group Schedule, Fall 2016

2016-09-13T02:22:56Z

Rmccarde: /* Week 11: 12 Dec - 16 Dec */

This page contains information about various upcoming events that are of interest to the group. __NOTOC__
{| width=60%
|- valign=top
| width=50% |
* {{RMM public schedule|Richard's calendar (travel)}}
| width=50% |
* [[Group Schedule, Summer 2016]]
|}

The schedule for group and subgroup meetings is given below. Contact Richard if you need to change the schedule. Unless otherwise noted, here are the locations of the meetings:

:{| width=100%
|- valign=top
| width=30% |
* Group meetings - 213 ANB
| width=30% |
* Biocircuits subgroup - 111 Keck
| width=30% |
* NCS subgroup - 243 ANB
|}

{| width=100% border=1

|- valign=top
| width=25% |
=== Week 0: 26 Sep - 30 Sep ===
'''Biocircuits: Mon, 10a-12p'''
* Mark Prator (short)

| width=25% |

=== Week 1: 3 Oct - 7 Oct ===
'''Biocircuits: Mon, 10a-12p'''
* Richard is in town, no biocircuits

| width=25% |

=== Week 2: 10 Oct - 14 Oct ===
'''Biocircuits: Mon, 10a-12p'''
* Shaobin Guo (long)
* Victoria Hsiao (short)

|- valign=top
| width=25% |

=== Week 3: 17 Oct - 21 Oct ===
'''Biocircuits: Tues, 10a-12p'''
* Vipul Singhal (short)
* James Parkin (long)

| width=25% |

=== Week 4: 24 Oct - 28 Oct ===
'''Biocircuits: Mon, 10a-12p'''
* Yong Wu (long)
* Ania Baetica (short)

| width=25% |

=== Week 5: 31 Oct - 4 Nov===
'''Biocircuits: Mon, 10a-12p'''
* Anandh Swaminathan (long)
* Andrey Shur (short)

|- valign=top
| width=25% |

=== Week 6: 7 Nov - 11 Nov ===
'''Biocircuits: Mon, 10a-12p'''
* William Poole (short)
* Miki Yun (short)
| width=25% |

=== Week 7: 14 Nov - 18 Nov ===
'''Biocircuits: Mon, 10a-12p'''
* Richard is in town, no biocircuits

| width=25% |

=== Week 8: 21 Nov - 25 Nov ===
'''Biocircuits: Mon, 11a-12p'''
* Lab cleanup
* HAPPY THANKSGIVING BREAK

|- valign=top
| width=25% |
=== Week 9: 28 Nov - 2 Dec ===
'''Biocircuits: Mon, 10a-12p'''
* Anu Thubagere (long)
* Cindy Ren (short)

| width=25% |
=== Week 10: 5 Dec - 9 Dec ===
'''Biocircuits: Mon, 10a-12p'''
* Sam Clamons (long)
* Andrew Montequin (undergrad)

| width=25% |

=== Week 11: 12 Dec - 16 Dec ===
'''Biocircuits: Mon, 10a-12p'''
* Rory Williams (rotation)
* Reed McCardell (short)

|- valign=top
| width=25% |

=== Week 12: 19 Dec - 23 Dec ===
'''WINTER BREAK'''
* have a good vacation!

| width=25% |

=== Week 13: 26 Dec - 30 Dec ===
'''WINTER BREAK'''
* have a good vacation!

| width=25% |
=== Week 14: 2 Jan - 6 Jan ===
'''WINTER BREAK'''
* have a good vacation!
|}

Group Schedule, Fall 2016

2016-09-13T02:22:38Z

Rmccarde: /* Week 10: 5 Dec - 9 Dec */

This page contains information about various upcoming events that are of interest to the group. __NOTOC__
{| width=60%
|- valign=top
| width=50% |
* {{RMM public schedule|Richard's calendar (travel)}}
| width=50% |
* [[Group Schedule, Summer 2016]]
|}

The schedule for group and subgroup meetings is given below. Contact Richard if you need to change the schedule. Unless otherwise noted, here are the locations of the meetings:

:{| width=100%
|- valign=top
| width=30% |
* Group meetings - 213 ANB
| width=30% |
* Biocircuits subgroup - 111 Keck
| width=30% |
* NCS subgroup - 243 ANB
|}

{| width=100% border=1

|- valign=top
| width=25% |
=== Week 0: 26 Sep - 30 Sep ===
'''Biocircuits: Mon, 10a-12p'''
* Mark Prator (short)

| width=25% |

=== Week 1: 3 Oct - 7 Oct ===
'''Biocircuits: Mon, 10a-12p'''
* Richard is in town, no biocircuits

| width=25% |

=== Week 2: 10 Oct - 14 Oct ===
'''Biocircuits: Mon, 10a-12p'''
* Shaobin Guo (long)
* Victoria Hsiao (short)

|- valign=top
| width=25% |

=== Week 3: 17 Oct - 21 Oct ===
'''Biocircuits: Tues, 10a-12p'''
* Vipul Singhal (short)
* James Parkin (long)

| width=25% |

=== Week 4: 24 Oct - 28 Oct ===
'''Biocircuits: Mon, 10a-12p'''
* Yong Wu (long)
* Ania Baetica (short)

| width=25% |

=== Week 5: 31 Oct - 4 Nov===
'''Biocircuits: Mon, 10a-12p'''
* Anandh Swaminathan (long)
* Andrey Shur (short)

|- valign=top
| width=25% |

=== Week 6: 7 Nov - 11 Nov ===
'''Biocircuits: Mon, 10a-12p'''
* William Poole (short)
* Miki Yun (short)
| width=25% |

=== Week 7: 14 Nov - 18 Nov ===
'''Biocircuits: Mon, 10a-12p'''
* Richard is in town, no biocircuits

| width=25% |

=== Week 8: 21 Nov - 25 Nov ===
'''Biocircuits: Mon, 11a-12p'''
* Lab cleanup
* HAPPY THANKSGIVING BREAK

|- valign=top
| width=25% |
=== Week 9: 28 Nov - 2 Dec ===
'''Biocircuits: Mon, 10a-12p'''
* Anu Thubagere (long)
* Cindy Ren (short)

| width=25% |
=== Week 10: 5 Dec - 9 Dec ===
'''Biocircuits: Mon, 10a-12p'''
* Sam Clamons (long)
* Andrew Montequin (undergrad)

| width=25% |

=== Week 11: 12 Dec - 16 Dec ===
'''Biocircuits: Mon, 10a-12p'''
* Rory Williams (rotation)
* Andrew Montequin (Undergrad)

|- valign=top
| width=25% |

=== Week 12: 19 Dec - 23 Dec ===
'''WINTER BREAK'''
* have a good vacation!

| width=25% |

=== Week 13: 26 Dec - 30 Dec ===
'''WINTER BREAK'''
* have a good vacation!

| width=25% |
=== Week 14: 2 Jan - 6 Jan ===
'''WINTER BREAK'''
* have a good vacation!
|}

Aug 2016 meeting schedule

2016-08-01T21:11:43Z

Rmccarde: /* 9 Aug (Tue) */

Richard will be in town 7-10 August 2016. Please sign up for a time to meet below.
__NOTOC__

{| border=1
|- valign=top
| width=25% |
==== 7 Aug (Sun) ====
* 2:15 pm: Open
* 3:00 pm: Open
* 3:45 pm: Yong
* 4:00 pm: Break
* 4:45 pm: Sam
* 5:30 pm: Open
* 6:30 pm: Open
| width=25% |

==== 8 Aug (Mon) ====
* 9-11 am: Integrase project meeting (Victoria, Andrey, Sam, Ania, Cindy)
<hr>
* 12:45 pm: Anandh
* 1:30 pm: Shaobin (if TXTL meeting changed to today)
* 2:15 pm: Richard C
* 3:00 pm: Victoria
* 3:45 pm: Break
* 4:00 pm: Open
* 4:45 pm: Anu
| width=25% |

==== 9 Aug (Tue) ====
* 8:30 am: Reed
* 9:15 am: Mark
* 10:00 am: Jaymie
* 11 am - 2 pm: DARPA Biological Control project meeting (Anandh, Ania, Cindy, James, Reed, Andrey, Sam?)
* 1:00 pm: Tung
* 1:45 pm: Hold: James
* 2:30 pm: Tony Fragoso
* 3:15 pm: Break
* 3:30 pm: Vipul
* 4:15 pm: Ioannis
* 5:00 pm: Ania
* 5:45 pm: Break
| width=25% |

==== 10 Aug (Wed) ====
* 9-11 am: TX-TL project meeting (Clare, Mark, Shaobin, Yong, Vipul, Sam, Miki)
* 11:00 am: Shaobin
* 11:45 am: Unavailable
* 12:45 pm: Miki
* 1:45 pm: Open
* 2:30 pm: Leave for airport
|}

Group Schedule, Winter 2016

2016-02-29T23:48:18Z

Rmccarde: /* Week 11: 14 Mar - 18 Mar */

This page contains information about various upcoming events that are of interest to the group. __NOTOC__
{| width=60%
|- valign=top
| width=50% |
* [[Schedule|Richard's calendar (travel)]]
| width=50% |
* [[Group Schedule, Fall 2015]]
|}

The schedule for group and subgroup meetings is given below. Contact Richard if you need to change the schedule. Unless otherwise noted, here are the locations of the meetings:

:{| width=100%
|- valign=top
| width=30% |
* Group meetings - 213 ANB
| width=30% |
* Biocircuits subgroup - 111 Keck
| width=30% |
* NCS subgroup - 243 ANB
|}

{| width=100% border=1

|- valign=top
| width=25% |
=== Week 1: 4 Jan - 8 Jan ===
* Richard in India (Mon-Fri)

| width=25% |

=== Week 2: 11 Jan - 15 Jan ===
* Richard in India (Mon-Fri)

| width=25% |

=== Week 3: 18 Jan - 22 Jan ===
'''NCS: Tue, 1p-2:30p'''
* Ioannis Filippidis (main)
* Benson Christalin (short)
'''Biocircuits: Tue, 3p-5p'''
* Yutaka Hori (long)
* Clare Hayes (short)

|- valign=top
| width=25% |

=== Week 4: 25 Jan - 29 Jan ===
'''Biocircuits: Tue, 10a-12p'''
* Vipul Singhal (long)
* Abel Chiao (short)
'''NCS: Wed, 10:30a-12p'''
* Cat McGhan (main)
* Ioannis Filippidis (short)

| width=25% |

=== Week 5: 1 Feb - 5 Feb ===
'''Biocircuits: Tue, 10a-12p'''
* Victoria Hsiao (long)
* Anandh Swaminathan (short)
'''NCS: Wed, 10:30a-12p'''
* Tony Fragoso (main)
* Open (short)

| width=25% |

=== Week 6: 8 Feb - 12 Feb ===
'''Biocircuits: Mon, 10a-12p'''
* Ania Baetica (long)
* Anu Thubagere (short)
'''NCS: Mon, 1:00p-2:30p Steele 110'''
* Sumanth Dathathri (main)
* Open (short)

|- valign=top
| width=25% |

=== Week 7: 15 Feb - 19 Feb ===
'''Biocircuits: Tue, 10a-12p'''
* Yong Wu (long)
* James Parkin (short)
'''NCS: Wed, 10:30a-12p'''
* Daniel Naftalovich (main)
* Open (short)

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=== Week 8: 22 Feb - 26 Feb ===
'''Biocircuits: Tue, 10a-12p'''
* Andrey Shur (long)
* Shaobin Guo (short)
'''NCS: Mon, 3:30p-5p'''
* Ivan Papusha (main)
* Open (short)

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=== Week 9: 29 Feb - 4 Mar ===
'''Biocircuits: Tue, 10a-12p'''
* Sam Clamons (short)
* Sean Sanchez (short)
* Tina Xu (UG)
'''NCS: Wed, 10:30a-12p'''
* Jiangang Li (main)
* Sumanth Dathathri (short)
|- valign=top
| width=25% |

=== Week 10: 7 Mar - 11 Mar ===
'''Biocircuits: Tue, 10a-12p'''
* Open (rotation)
* Tiffany Zhou (UG)
'''NCS: Wed, 10:30a-12p'''
* Benson Christalin (main)
* Benson Christalin (short)

| width=25% |

=== Week 11: 14 Mar - 18 Mar ===
'''Biocircuits: Tue, 10a-12p'''
* Reed McCardell (rotation)
* Andrew Montequin (UG)
'''NCS: Wed, 10:30a-12p'''
* Visitor (main)
* Open (Sumanth Dathathri)

| width=25% |

=== Week 12: 21 Mar - 25 Mar ===
* Richard out of town (Mon-Fri)
|}